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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_70902.1_34813
Locus scaffold70902.1 : 1 ... 3295 : -
To GenomeBrowser scaffold70902.1:1..3295
Genes list of scaffold scaffold70902.1
Synonym pfu_aug2.0_4383.1_12644

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_70902.1_34813.t1 1 1 Asp_protease_2 18 104 4.0e-06 27.2 2.8e-09 7.0e-06 26.4

Transcript
Transcript IDpfu_aug1.0_70902.1_34813.t1
Definition-
>pfu_aug1.0_70902.1_34813.t1
atgggaaagaaagaaaaaagagcaaaaagagatggtatatatgttaaaagaaaattaaacaatgtagatattgtatatac
tgcagatactggtgccacgaaaactgtggtatcagaaaagttttatgagaatctaccagtagaatggaaaccaaagttgg
taaagaaaagagctgttataacaggggcctccggagaaccatttcagttattaggcatgggtcactttgagatcaagctt
ggttcagtagctattacaaaagaattcatagttgcaaaaattgacgatgatgctcttttgggtatggatgtactacacga
tgagtcgggtggagctgatattttgattagtgaagggatcattcggatcaggggcgagagtctcccatgtgaacatcata
gaacaccaagggttcgggccgctgaagacctaaaggtaccaggtttcagtgaggctataatcaaagtgtatattgacaga
agacaagttaaaaatgacaaatttgatcttcttgttgaaccatgtgatgaatttacgtcaaaaagcggtattgtagtggc
atctactcttgtaaatatacagagaaaagtagctgtttctgtaagggttttgaacccaagtccctgtgacgtggacattt
atacaggaactgttgtaggcaatgctgaagtggttacggagtgtagtaaccctatttttgatgttgaggacccggatgaa
gaaaggaatatgtgttctatgagaagggttaaattaagaagatctcttagtcaaatgtgcagtaaagtaaagcctgagcg
caagggtgtttctgttgaagttccggaccatttaaaagagttgtatgaagactctggaccaatgtgtagtagtaatgaga
aagagagcatagttgatttgttaataaagcacgaagcagtgttttcaaaacacgagtttgatattggaaaaactaatttg
gttgaacatgtaattgaaacaaaagaaagtaaacctgttaagcagcccccacaaagagttccttttgcttatgcagagga
cgaaaagaaaactatagtggaacttgaaaacaaggcataa

Protein
Protein IDpfu_aug1.0_70902.1_34813.t1
Definition-
>pfu_aug1.0_70902.1_34813.t1
MGKKEKRAKRDGIYVKRKLNNVDIVYTADTGATKTVVSEKFYENLPVEWKPKLVKKRAVITGASGEPFQLLGMGHFEIKL
GSVAITKEFIVAKIDDDALLGMDVLHDESGGADILISEGIIRIRGESLPCEHHRTPRVRAAEDLKVPGFSEAIIKVYIDR
RQVKNDKFDLLVEPCDEFTSKSGIVVASTLVNIQRKVAVSVRVLNPSPCDVDIYTGTVVGNAEVVTECSNPIFDVEDPDE
ERNMCSMRRVKLRRSLSQMCSKVKPERKGVSVEVPDHLKELYEDSGPMCSSNEKESIVDLLIKHEAVFSKHEFDIGKTNL
VEHVIETKESKPVKQPPQRVPFAYAEDEKKTIVELENKA

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