Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7099.1_52889
Locus scaffold7099.1 : 3104 ... 20727 : -
To GenomeBrowser scaffold7099.1:3104..20727
Genes list of scaffold scaffold7099.1
Synonym pfu_aug2.0_670.1_01026

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7099.1_52889.t1 1 1 Adap_comp_sub 53 122 1.3e-06 27.7 9.6e-11 1.4e-06 27.6

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_7099.1_52889.t1
Definition-
>pfu_aug1.0_7099.1_52889.t1
gactttggtctagttcagatagcagatacagataagttaaggccatacatacagtctgatcctatcctcgtcagatctgg
cagagaaccaacaagtgatctaacttccagaatgtttggaatagagaccaaagtgtcaccaagttctgcatccagcaaat
cagttatatcatccaataaaagtttaatcaacaattcaaattctgtcatcagtaagagtgatataggaccatatggcctt
gactttgagatctcgggatattcatcaactggattgttaatcagaaatgtcaaggtcatgtcaaaggacaagtctaaccc
caagaaatggatcagatttattacagttagtgacaactacatcatcaaaggctaa

Protein
Protein IDpfu_aug1.0_7099.1_52889.t1
Definition-
>pfu_aug1.0_7099.1_52889.t1
DFGLVQIADTDKLRPYIQSDPILVRSGREPTSDLTSRMFGIETKVSPSSASSKSVISSNKSLINNSNSVISKSDIGPYGL
DFEISGYSSTGLLIRNVKVMSKDKSNPKKWIRFITVSDNYIIKG

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