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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7122.1_02381
Locus scaffold7122.1 : 1 ... 24257 : +
To GenomeBrowser scaffold7122.1:1..24257
Genes list of scaffold scaffold7122.1
Synonym pfu_aug2.0_392.1_07452

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7122.1_02381.t1 1 1 CS 361 435 4.7e-08 33.4 2.3e-11 1.7e-07 31.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7122.1_02381.t1 gi|194675123|ref|XP_871956.3| 3.0e-15

Transcript
Transcript IDpfu_aug1.0_7122.1_02381.t1
Definition-
>pfu_aug1.0_7122.1_02381.t1
tatgtgatgatgaatgtattgagcgtctagcaggcctccatttaaacgcccaggaagtcatccattatgacatgtccgct
acaaagacgagattcgggaatcgtctgttctgtatgctggacaattactccaacccgtttcagaaaaaggagcagaagga
ggcagagagggaagactcgttagtaacggtgttacccaaatctcacctgatatttacagaggagtgttttaaccaagcag
catctatccataatctccttacacggataaagtgtaacgtgccgaaagaacttcaaagtctaatgctgggaatgaaggag
ggcaatgaggaaaatgatgagaaagaactatgtccttaccttaaggcttatggaacatgcaggcgagaacacaagtgtga
gcagagacacactattttatgtgaagtggacgcaccggtcaacgacaaattaacagcaggggaagttaaggttagagtag
tgaatgtagttggtgccagtcgttactatgttcaggttagagtagtgaatgtagtggatgccagtcgttactacgtccgc
gtactggagcaccgatttgatggcaccaaggaggaccactctacagactgtctggtgctgttaaaagaaattacatcctg
gtattcagacaaccttaacagagtcaaatatggagaagaatgggtgaaggaaagcggtgatgcattatgggatatgacac
atcacgtcaatgaagacaagaaaagacttgttgcgaagaatagccgtcctggaatacaacttcagtccatacgtgcaata
cacagactagtcaaagcaaactccagtgcttcggacgttatccatcatttcaaagtttgtgggattttgcagaagcattt
agaagaagcagaccaagatgattttgtcgagactctgttcgccttccttccagtcctagcaaaaaagaacgggaaacaag
atcagcagcagagggaaaaattaagtcgtgctgtggccttaaagctggaacagttgaatagcaatgaaaagtcccatact
ccaaagtctgatgaaactttctctgtccatccctctctacctccagtacattggtcccagaattttgccaaaatcatcct
ccgaatcgttttgccgagtgtgaaaacagaagacaaccctatcatgctcagtgatacagattttagtttcagggcgaaag
ttgatggaaaagtgtttgccttcaactactcgctgtatgggaagattgtgccatctttatgtaaatctctagtcaagagt
ggggaggtgctggtgtcactccgaaaggcagagaagggaaggtggaagagactgctgagacaagaacataggggagggga
tgatcaaggtcaaggtcaaaaccttgtgaatagcgtggaagagaaagcatcaaatttaccacacatgttccctacaccta
gaggatga

Protein
Protein IDpfu_aug1.0_7122.1_02381.t1
Definition-
>pfu_aug1.0_7122.1_02381.t1
CDDECIERLAGLHLNAQEVIHYDMSATKTRFGNRLFCMLDNYSNPFQKKEQKEAEREDSLVTVLPKSHLIFTEECFNQAA
SIHNLLTRIKCNVPKELQSLMLGMKEGNEENDEKELCPYLKAYGTCRREHKCEQRHTILCEVDAPVNDKLTAGEVKVRVV
NVVGASRYYVQVRVVNVVDASRYYVRVLEHRFDGTKEDHSTDCLVLLKEITSWYSDNLNRVKYGEEWVKESGDALWDMTH
HVNEDKKRLVAKNSRPGIQLQSIRAIHRLVKANSSASDVIHHFKVCGILQKHLEEADQDDFVETLFAFLPVLAKKNGKQD
QQQREKLSRAVALKLEQLNSNEKSHTPKSDETFSVHPSLPPVHWSQNFAKIILRIVLPSVKTEDNPIMLSDTDFSFRAKV
DGKVFAFNYSLYGKIVPSLCKSLVKSGEVLVSLRKAEKGRWKRLLRQEHRGGDDQGQGQNLVNSVEEKASNLPHMFPTPR
G

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