Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7127.1_67623
Locus scaffold7127.1 : 13046 ... 16896 : +
To GenomeBrowser scaffold7127.1:13046..16896
Genes list of scaffold scaffold7127.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7127.1_67623.t1 gi|241569831|ref|XP_002402727.1| conserved hypothetical protein [Ixodes scapularis] 6.0e-24

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_7127.1_67623.t1
Definition-
>pfu_aug1.0_7127.1_67623.t1
atgaaaatatcactacaagacattcaccagcgtaaaccatacaaaggttccatacaacatgatcagcaagtggtgtcacg
ttctacggtatccaggtccatattagacatgcacggcaagtgtgatcccacacccgccctggataaacttaatccgtaca
gggaggatggcaaagactgtatgaagttctacacagatcctaactacttctttgagttgtggtacctggaaatccagaag
gaaatggaacagaaaaaaatggaagtccgggaacggagacggaggaaggtattaaaatatcagtga

Protein
Protein IDpfu_aug1.0_7127.1_67623.t1
Definition-
>pfu_aug1.0_7127.1_67623.t1
MKISLQDIHQRKPYKGSIQHDQQVVSRSTVSRSILDMHGKCDPTPALDKLNPYREDGKDCMKFYTDPNYFFELWYLEIQK
EMEQKKMEVRERRRRKVLKYQ

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