Gene
| Gene Model ID | pfu_aug1.0_7130.1_38464 |
|---|---|
| Locus | scaffold7130.1 : 7606 ... 17161 : + |
| To GenomeBrowser | scaffold7130.1:7606..17161 |
| Genes list of scaffold | scaffold7130.1 |
| Synonym | pfu_aug2.0_494.1_14222 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7130.1_38464.t1 | 12 | 1 | zf-C2H2 | 110 | 133 | 7.3e-10 | 38.6 | 0.0015 | 3.3 | 8.2 |
| pfu_aug1.0_7130.1_38464.t1 | 12 | 2 | zf-C2H2 | 193 | 216 | 7.3e-10 | 38.6 | 0.00034 | 0.73 | 10.3 |
| pfu_aug1.0_7130.1_38464.t1 | 12 | 3 | zf-C2H2 | 386 | 407 | 7.3e-10 | 38.6 | 0.079 | 170.0 | 2.8 |
| pfu_aug1.0_7130.1_38464.t1 | 12 | 4 | zf-C2H2 | 480 | 503 | 7.3e-10 | 38.6 | 2.0e-05 | 0.043 | 14.1 |
| pfu_aug1.0_7130.1_38464.t1 | 12 | 5 | zf-C2H2 | 513 | 532 | 7.3e-10 | 38.6 | 0.0032 | 6.8 | 7.2 |
| pfu_aug1.0_7130.1_38464.t1 | 12 | 6 | zf-C2H2 | 596 | 619 | 7.3e-10 | 38.6 | 0.012 | 26.0 | 5.4 |
| pfu_aug1.0_7130.1_38464.t1 | 12 | 7 | zf-C2H2 | 645 | 664 | 7.3e-10 | 38.6 | 0.00024 | 0.5 | 10.8 |
| pfu_aug1.0_7130.1_38464.t1 | 12 | 8 | zf-C2H2 | 724 | 734 | 7.3e-10 | 38.6 | 0.25 | 530.0 | 1.3 |
| pfu_aug1.0_7130.1_38464.t1 | 12 | 9 | zf-C2H2 | 753 | 775 | 7.3e-10 | 38.6 | 0.003 | 6.3 | 7.3 |
| pfu_aug1.0_7130.1_38464.t1 | 12 | 10 | zf-C2H2 | 793 | 815 | 7.3e-10 | 38.6 | 1.6e-07 | 0.00034 | 20.7 |
| pfu_aug1.0_7130.1_38464.t1 | 12 | 11 | zf-C2H2 | 821 | 844 | 7.3e-10 | 38.6 | 3.8e-06 | 0.008 | 16.4 |
| pfu_aug1.0_7130.1_38464.t1 | 12 | 12 | zf-C2H2 | 856 | 878 | 7.3e-10 | 38.6 | 0.00019 | 0.41 | 11.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7130.1_38464.t1 | gi|326676493|ref|XP_689690.3| | 2.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_7130.1_38464.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7130.1_38464.t1 atgcatgggtcggcacggaaaaagtcgattgaaaagatgaccactgtaaagaaggaagtggcgacccctgtgaaggaggg gagaaacgatcaggaaacaacttcagatgttcagcagttagataaaaagaagggacaacagatttcaaagaagaaaaata acgaacaggaaacacatacaaaaattgggcatttagataaaatgaaaggacaaaaaacgtcaaagaaagttgtgacggaa actcatgatgaaaagatgcatgtagaaagtgacagtcctaacacactcggaaaatgtgtggtaaataaattaacggggag tagggaatttcattgcagggactgtgagtttataacgaatcacgccatgacactacggaagcatgtaaggcaaaatcaca aagaggcctggaatagatggtataatccttcaagtattacggaagaaacacgtgaggaagttaataatgataataatgat gaagcgtcagaaggagttaggggaaaaagaaaatcggctattctatttaaagaaaaaatgatggagctaaaacagcgttc tttggagaagaagaaatttatgtgttcaatttgttcccgtatgtttacgcagaggcgacttactgttaatcatgttataa aatttcaccctggaaacaacccaaataaggtcatagtgtcacaggaggatggtgaggaagaggcagggaagaagaaggga gcttcgaagaagacagccacagacaaagaatggtcaccaaagaagataaagaaagagaagaaaggaaatgcggaagagga agaagtgaatgaatcaaagaaagaagaaagtgatgaaaatgaagaaaatgatgatatggactatagggaagatgaagaaa atgtggaacaacatgaggagggagaggaagaaaggaagaaatctaaaagaaattccaaattagtgaagcctaaacccaag gagaaaaatctcactgaagaagaaaatgaagaggatactgaagaaaggacggagcctggagaggaaggagaaacgcaaaa tgaagaagcaagtgttgaaagaagaagttctagggtaaaaaggaagaaaaaagatgggaacgaagatgaatcaaatttgt ccagtgaagaatacgtgacatcagatcaaacaagttttttctgttacgagtgtggtactttttttacgtgcctgagaggt ttaatgaagcacatggatatcacaaggcatacgggtaacccatacaagaagatcaaggaacgcaaatgtctacctataga acatcagtcaagtatgagcncaaagaatctctatgaagctcatttgaaggaattcaatcatcaaagggacactggtgata aagattcagaggaaaaggagaacatgttgatagaaacaggtcagccgatacctgtcgaagatgaagtaccgcagacgaaa tgtctcgagtgtggaaaagagtaccccactccggagcaattcagggcgcatgttagaataacggaacacgagcagttttc cgctacagaaacgatatatcagtgctatacttgtatgaaatattttgtgaatgaagatgctttgaccagtcacatgtggc atactcgacacactggaatcacagacaaagagaaggagcgtagatatgtaccggtaaaatgttataaagcagggagtaaa cgtaatatgtggttccgatgcgtttgttgtgcttcagaatataaactagaagaaaacgctaaagtacatgtagcgaaagg agattgcttgcccagatacaaacggaaatgtcaagtttgcaacgttcacttcagtagctttaataagtaccagttacact tgaagcgtaatgttcacattagaagagatccgaagacaagaaaggaagggccaaaagaagatacagagattccatcggaa agggaaacgatctataaatgctacacatgtgatcaatactatgaaacacttgaaagtctgcgcatgcatatggagtgcac aaaacattcaggtgactccaaaaaggacggagaaagacatgtggaattcttcacagagccgaacggtttggagaaatatc ggtgcagtctttgtaaaatagaattctgttaccagaaaaactgcaaggaacacgtggaaagatcggcgtgtaaaaaaaag tataaaagaaaatgcccgttgtgtaatatcacgttttactccggtttcaacatctatcaagcacatatgttagagaagca cagcgatgagtacccgtttaagtgtgaggactgcggtaaaatgtttcaccatttagcagggtttaactgccatcgtactc agcacaagcgtggaccctatgttcctaaagcagctcaggaggaatcggccgttatgtatgcatgtgatatttgtggtaag tcgtacacggacaaaggaaacatgaagagacatagggacatgcacaaccgtggcagagatttcacgtgtgaattctgcgg caaaaactacaaaagaaaagactttcttaagttccatctgaagtacagtcacggaggtaggagcaatcctgacgacccta attgtgtatgtgatatttgtggtaaagtcttagccacgccaaaaagcaagtacgctcacatgaagatggcccactctgac gagaaaccgtactgctgtgagatttgtggatttcgggtcaaagtagaggtcatagaagaagccggggaagacatttctga tgcagaatctgagatggaaatagttactgatgagacactacttctggagcaagatacagcgccatctaccagtcaaccag tggagaaaactagacaacgggattttgtccaagaggctcagacacaggtacgtctttgttga |
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Protein
| Protein ID | pfu_aug1.0_7130.1_38464.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7130.1_38464.t1 MHGSARKKSIEKMTTVKKEVATPVKEGRNDQETTSDVQQLDKKKGQQISKKKNNEQETHTKIGHLDKMKGQKTSKKVVTE THDEKMHVESDSPNTLGKCVVNKLTGSREFHCRDCEFITNHAMTLRKHVRQNHKEAWNRWYNPSSITEETREEVNNDNND EASEGVRGKRKSAILFKEKMMELKQRSLEKKKFMCSICSRMFTQRRLTVNHVIKFHPGNNPNKVIVSQEDGEEEAGKKKG ASKKTATDKEWSPKKIKKEKKGNAEEEEVNESKKEESDENEENDDMDYREDEENVEQHEEGEEERKKSKRNSKLVKPKPK EKNLTEEENEEDTEERTEPGEEGETQNEEASVERRSSRVKRKKKDGNEDESNLSSEEYVTSDQTSFFCYECGTFFTCLRG LMKHMDITRHTGNPYKKIKERKCLPIEHQSSMSXKNLYEAHLKEFNHQRDTGDKDSEEKENMLIETGQPIPVEDEVPQTK CLECGKEYPTPEQFRAHVRITEHEQFSATETIYQCYTCMKYFVNEDALTSHMWHTRHTGITDKEKERRYVPVKCYKAGSK RNMWFRCVCCASEYKLEENAKVHVAKGDCLPRYKRKCQVCNVHFSSFNKYQLHLKRNVHIRRDPKTRKEGPKEDTEIPSE RETIYKCYTCDQYYETLESLRMHMECTKHSGDSKKDGERHVEFFTEPNGLEKYRCSLCKIEFCYQKNCKEHVERSACKKK YKRKCPLCNITFYSGFNIYQAHMLEKHSDEYPFKCEDCGKMFHHLAGFNCHRTQHKRGPYVPKAAQEESAVMYACDICGK SYTDKGNMKRHRDMHNRGRDFTCEFCGKNYKRKDFLKFHLKYSHGGRSNPDDPNCVCDICGKVLATPKSKYAHMKMAHSD EKPYCCEICGFRVKVEVIEEAGEDISDAESEMEIVTDETLLLEQDTAPSTSQPVEKTRQRDFVQEAQTQVRLC |
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