Gene
| Gene Model ID | pfu_aug1.0_714.1_07636 |
|---|---|
| Locus | scaffold714.1 : 7636 ... 23102 : + |
| To GenomeBrowser | scaffold714.1:7636..23102 |
| Genes list of scaffold | scaffold714.1 |
| Synonym | pfu_aug2.0_815.1_17856 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_714.1_07636.t1 | 2 | 1 | UNC-93 | 11 | 141 | 4.2e-40 | 136.8 | 1.49939e-42 | 1.1e-38 | 132.1 |
| pfu_aug1.0_714.1_07636.t1 | 2 | 1 | MFS_1 | 31 | 305 | 1.3e-13 | 50.3 | 2.6e-15 | 2.0e-11 | 43.2 |
| pfu_aug1.0_714.1_07636.t1 | 2 | 2 | MFS_1 | 213 | 401 | 1.3e-13 | 50.3 | 1.5e-08 | 0.00011 | 21.0 |
| pfu_aug1.0_714.1_07636.t1 | 2 | 2 | UNC-93 | 314 | 340 | 4.2e-40 | 136.8 | 0.00069 | 5.1 | 6.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_714.1_07636.t1 | gi|291224276|ref|XP_002732131.1| | PREDICTED: UNC93-like protein MFSD11-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_714.1_07636.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_714.1_07636.t1 atgattatgacgtctgcagtatggtatcaaaatgaaagtgtgctggatagtgctaaggctgactcgaatggaacatttac tgggaatggatacactagtttgagtatcatctacattgtgttctcagcagccaattggattgcacctcctattgtgagcc ttgttggcccaaagttcaccatgttcatgggaagcatattgtatctgttatttatagcatcttttctgaagccaatgacc tgggcattatacacaggatctgtgctggtgggattaggggcagcaatactatggacagctcagggaaactttctgactat caactcggactctgaaactgtaaccaggaatagtggagtattttgggctcttttacaatgcagtttgttgtttggaaaca tgtacagtcactttgtactgaattccggtaccacaataacatcagatgagaggtttaaattatttgccggactgacagga gctgctgctttaggtgtcatctgcttcctgtttttaaggaaaccaagggcgtctgatggagaaaatctaatcaacataaa tgatccagatgcacagagtggacctttgatgtccataaaaagatctttccagctactgaagaccagagaaatgttacttt taagtgttgtaatagcatatacaggtattgagttgacattctttagtggagtatatgggacgtgtatatctaacaataaa cacttcggtgcggaagccaagggactgataggaatatcaggcatgttcataggtgtaggagaaattctaggtggtgcagc atttggtctgtttggaaagagaaccaacaaatatggccgtgatcctattgtgttgttaggatatgtgacccacatgattt gcttctacctgatatttattaacttgccagatgaatctcctgtcaaagtaacagattcagctacatatctcacatctaat aaatatattgccattctttgttcattcatgttgggatttggagatgccagctttaatactcagatctactccatcgttgg ttttatgtatcctgaggacagctcacctgcatttgcattgttcaaatttgtccagtcagtcagtgccgctgcagccttct actacagcctacatctcagccttcgatggcagctcctcattctagccgtcacaggctcggcaggtactctgtgtttcgcc gtcgtagaatggggagtttccatcgccatgaaggaaggctatcagtctatatcctga |
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Protein
| Protein ID | pfu_aug1.0_714.1_07636.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_714.1_07636.t1 MIMTSAVWYQNESVLDSAKADSNGTFTGNGYTSLSIIYIVFSAANWIAPPIVSLVGPKFTMFMGSILYLLFIASFLKPMT WALYTGSVLVGLGAAILWTAQGNFLTINSDSETVTRNSGVFWALLQCSLLFGNMYSHFVLNSGTTITSDERFKLFAGLTG AAALGVICFLFLRKPRASDGENLININDPDAQSGPLMSIKRSFQLLKTREMLLLSVVIAYTGIELTFFSGVYGTCISNNK HFGAEAKGLIGISGMFIGVGEILGGAAFGLFGKRTNKYGRDPIVLLGYVTHMICFYLIFINLPDESPVKVTDSATYLTSN KYIAILCSFMLGFGDASFNTQIYSIVGFMYPEDSSPAFALFKFVQSVSAAAAFYYSLHLSLRWQLLILAVTGSAGTLCFA VVEWGVSIAMKEGYQSIS |
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