Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_714.1_07637
Locus scaffold714.1 : 23207 ... 26785 : -
To GenomeBrowser scaffold714.1:23207..26785
Genes list of scaffold scaffold714.1
Synonym pfu_aug2.0_815.1_17857

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_714.1_07637.t1 2 1 Mab-21 57 311 8.5e-18 64.4 6.7e-15 5.0e-11 42.2
pfu_aug1.0_714.1_07637.t1 2 2 Mab-21 338 395 8.5e-18 64.4 4.1e-08 0.00031 19.9

Transcript
Transcript IDpfu_aug1.0_714.1_07637.t1
Definition-
>pfu_aug1.0_714.1_07637.t1
atggataaactctcccaatctttgacggaccttgacaaacgaatccaaatttctacagctggggaagttcggagaataca
acatagcttggaaacaactctcagaaaaaccttagatgttgtgaagaaaaaggaccaaagactgcaagggaaattacttc
ctgtgggaagttattattcagatctcaaaatcgggtttccagatgaatttgactacctatatgaactcgaatccattcag
gaaaaactcaacttcgaagtgcaaccttctgggttcagtgggagcaagaatctatggagaacaccaaaaggtgatccagg
caaaaagaaaattttgctgaaaacgccagaaacgtataaatgtacccaagattctgacgattctgtaaagtggttacatt
gcattaatgggaaaagacgtaaagatatagggaatgagtatgttctcgatccagtaggggtcaaaaacactttttacttt
gcagttttggaggtcataagaggcatggatccatcacagcttccaagatacttgtctatagacagaacacaagaagccac
cttcttgtatggtccggctgtaacactattcttcacgtggaatgggagattttacaagaacttaaaaattacagtagatt
tgactgtctgtataaaaacagctgaatgggtggagaaatctggtctacttatgtctgaacatttaaatcctgaaagtagt
ttgagtggcatacttcaagtggagattccacgatgtggatttcacctggttccacatatatctgagaggggtcatgtaca
gtggaaaatatccacctccttcctcgaaacaaaaatatttgcaagatttcacaaggatgcatctttgaaacaaatcatta
gaatcgtcaaatctgtgaaagatctcaacctgaagcatcgaccagatttgaccctactgaatgatccatcactttcttat
tttgtgcggtttcacaatttctatgccgggaaggattatgatgagaacttcaaacatatggtttcgtctttcttgataaa
aaatgttgtcatgaacatgtgtggatcggcttcttctccagaatggaaaaatgcaaccatctccacactctatctcctta
cattgacattcctctacaaaaccttagcatatggaactttacagaattttttcttaccacagcaaaaactaaatattcca
gaatttggtgatattttacctggatttcacaagattttcgctgaaattgagagcatgatgccctctgaaaatgccagaaa
ttgtgctgaacttggggatctctacaacaaaccattttgtatcggaagtgcagttgctatatttggaaccacaaaggaac
acatagactttcattttggtgaatgttggcagccatcttga

Protein
Protein IDpfu_aug1.0_714.1_07637.t1
Definition-
>pfu_aug1.0_714.1_07637.t1
MDKLSQSLTDLDKRIQISTAGEVRRIQHSLETTLRKTLDVVKKKDQRLQGKLLPVGSYYSDLKIGFPDEFDYLYELESIQ
EKLNFEVQPSGFSGSKNLWRTPKGDPGKKKILLKTPETYKCTQDSDDSVKWLHCINGKRRKDIGNEYVLDPVGVKNTFYF
AVLEVIRGMDPSQLPRYLSIDRTQEATFLYGPAVTLFFTWNGRFYKNLKITVDLTVCIKTAEWVEKSGLLMSEHLNPESS
LSGILQVEIPRCGFHLVPHISERGHVQWKISTSFLETKIFARFHKDASLKQIIRIVKSVKDLNLKHRPDLTLLNDPSLSY
FVRFHNFYAGKDYDENFKHMVSSFLIKNVVMNMCGSASSPEWKNATISTLYLLTLTFLYKTLAYGTLQNFFLPQQKLNIP
EFGDILPGFHKIFAEIESMMPSENARNCAELGDLYNKPFCIGSAVAIFGTTKEHIDFHFGECWQPS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495