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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7140.1_09498
Locus scaffold7140.1 : 183 ... 4445 : -
To GenomeBrowser scaffold7140.1:183..4445
Genes list of scaffold scaffold7140.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7140.1_09498.t1 1 1 AAA_7 33 145 5.7e-24 84.6 2.3e-27 6.7e-24 84.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7140.1_09498.t1 gi|156368872|ref|XP_001627915.1| predicted protein [Nematostella vectensis] 0.0

Transcript
Transcript IDpfu_aug1.0_7140.1_09498.t1
Definition-
>pfu_aug1.0_7140.1_09498.t1
atgccgtctgcccagcctacactgtatgagtacttctatgatggtgaggagaagaaatggataccatgggtcaagaaagt
accgaagtacgtccacgacccggcaaagaagtataacgagatcttggttcccacggtagatacagtcagaaccacctggt
tgttagagttgatggtcggaatcaaacatccagtagtactagttggagagactggaacgtctaaatcggcgactacatcc
aacttcctgaggaaactcgaccccgagtcacatctgctactgaatatgaacttctccagtagaacatcttctctggacgt
acagaggaacttagaggctagcgtagagaaaaggacaaaggacacatacggacctccacctggtaaacgtctgctcatct
ttatagatgatatgaacatgcctcaggtaataattttcgtcagtgcctttcttgaagaaattatgtatcgacgaatataa

Protein
Protein IDpfu_aug1.0_7140.1_09498.t1
Definition-
>pfu_aug1.0_7140.1_09498.t1
MPSAQPTLYEYFYDGEEKKWIPWVKKVPKYVHDPAKKYNEILVPTVDTVRTTWLLELMVGIKHPVVLVGETGTSKSATTS
NFLRKLDPESHLLLNMNFSSRTSSLDVQRNLEASVEKRTKDTYGPPPGKRLLIFIDDMNMPQVIIFVSAFLEEIMYRRI

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