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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7146.1_52897
Locus scaffold7146.1 : 26497 ... 37885 : -
To GenomeBrowser scaffold7146.1:26497..37885
Genes list of scaffold scaffold7146.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7146.1_52897.t1 1 1 Mmp37 4 74 3.4e-14 52.6 2.4e-18 3.6e-14 52.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7146.1_52897.t1 gi|91083107|ref|XP_969706.1| PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Tribolium castaneum] 5.0e-13

Transcript
Transcript IDpfu_aug1.0_7146.1_52897.t1
Definition-
>pfu_aug1.0_7146.1_52897.t1
atgtgccagaatttactaaaacatcatcagaaaaacgtcaagaaatccttggacattgaagaggtcataagggtcatggc
ctttgaccctaactgtgatgaacgagtagcggacgctatcagagacattgtttttaaatccagtgcaactcaaagtatta
aaagtttctttacagccggtgtgttcaagtccttgaagtatagtgcaagaaaaatacggaagatgagagaaggaaataaa
taa

Protein
Protein IDpfu_aug1.0_7146.1_52897.t1
Definition-
>pfu_aug1.0_7146.1_52897.t1
MCQNLLKHHQKNVKKSLDIEEVIRVMAFDPNCDERVADAIRDIVFKSSATQSIKSFFTAGVFKSLKYSARKIRKMREGNK

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