Gene
| Gene Model ID | pfu_aug1.0_71500.1_71072 |
|---|---|
| Locus | scaffold71500.1 : 2449 ... 3025 : - |
| To GenomeBrowser | scaffold71500.1:2449..3025 |
| Genes list of scaffold | scaffold71500.1 |
| Synonym | pfu_aug2.0_315.1_17280 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_71500.1_71072.t1 | 1 | 1 | 7tm_1 | 1 | 153 | 4.1e-19 | 68.7 | 4.0e-22 | 4.5e-19 | 68.5 |
| pfu_aug1.0_71500.1_71072.t1 | 1 | 1 | 7TM_GPCR_Srx | 1 | 148 | 5.6e-09 | 35.5 | 5.9e-12 | 6.7e-09 | 35.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_71500.1_71072.t1 | gi|260823842|ref|XP_002606877.1| | hypothetical protein BRAFLDRAFT_126347 [Branchiostoma floridae] | 4.0e-17 |
Transcript
| Transcript ID | pfu_aug1.0_71500.1_71072.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_71500.1_71072.t1 atgtcgctggacagatttatggcagtgtgtttgccttacttctacaaggtaaatatcaaaccgaaaattgtcaacatcat catgatcgccatattcctctgtgccttcctaatagcagtgttaccaattgctcatttcggaagtaatgtaatccatgagc ccgggtcgtggtgcttttttgattttcatggtgtttccattctacagcgcttgtactcttactcttatgccttcatcgga atgttcataatcagtttgaccaccattttgaacatcatacttattatttaccttggaagagaacggaaacggaaagacaa tgaacaaagaaaatcaagtgtaaatagcatcagtaaccggatccggaaacaaaacgatatttacttcatggtattccttt ccggtatccttctcgttttcggaatatgctggacacctttcatggtaagatatatgttaattgtgatattttaa |
|
Protein
| Protein ID | pfu_aug1.0_71500.1_71072.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_71500.1_71072.t1 MSLDRFMAVCLPYFYKVNIKPKIVNIIMIAIFLCAFLIAVLPIAHFGSNVIHEPGSWCFFDFHGVSILQRLYSYSYAFIG MFIISLTTILNIILIIYLGRERKRKDNEQRKSSVNSISNRIRKQNDIYFMVFLSGILLVFGICWTPFMVRYMLIVIF |
|