Gene
| Gene Model ID | pfu_aug1.0_7176.1_09504 |
|---|---|
| Locus | scaffold7176.1 : 10026 ... 19596 : + |
| To GenomeBrowser | scaffold7176.1:10026..19596 |
| Genes list of scaffold | scaffold7176.1 |
| Synonym | pfu_aug2.0_1522.1_08416 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7176.1_09504.t1 | 1 | 1 | p450 | 2 | 298 | 0.0 | 159.2 | 0.0 | 0.0 | 158.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7176.1_09504.t1 | gi|318103843|ref|NP_001187242.1| | steroid 17-alpha-hydroxylase/17,20 lyase [Ictalurus punctatus] | 3.00004e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7176.1_09504.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7176.1_09504.t1 atgccaccgggacctaaaccatggcctgtgattggtaaccttcctcatattgtgggacaggatctacatatcgcgcttct gaaactgagtaagaactttggaaagatgttttggcttaagttagccggcgaggaggtcctcgtggtcaacaatatggacg ctgcagtggcctgttttgttagacagggtaagatcttttctggacgacccaagaagagtaagtcagtggacgtgatgctt ggtgacggcttggacattgtcatgaatgatctgtccccggaacttaaattccacaggaaaatcgtccattcgtttcttgc ttcacaaactaattctgggaaagaccgactggagaggatattgctaagggaggccgatagcttccaggaaacactgagaa atttacaccaaaataagacatgttttgatccaaaattccacgtggcgcgggttgtggccaatgttctgagtcagtgtatt ttgaaccacagatttgacgatgttgatgaagaatttcatgagcaactcagaatcgttcaagacattgttgacaatattga aagttttaacatagtggatatattcccatggcttgagcatttacctattccaagttggagaagataccttaaaagcttgg agaaaaaggacagatggatattcaacgtcattcagaaacatcgagagagtccagctgagtctggccacaaagacttggtg gacctcatgttggagcaccagaaagcagccatagagaagaacgatacaaagcagaccaaactgttaaaggacactaatat aggacatatcgtacatgaactgtttggaggaggaatcgaatctacaaccatgagcatactgtggtttattctgtatctga tcagacatccagaggacaccgggtatgtcttgggtcagccattgctaaaatgtccattttccttttctgtgcttgtctgg tctcaaaatacaagttcactgttcccgatggagaaggactacctgatccgacgcctaacgctggactatcgaacagacca aaacctttctcaatcaagcttattgaaagatgaaggaaaaggaggacagggctacccaaaatcccttatcatcaagatcg gtgaattgccagttgtttacctacattactttcgttttcgtttcaatgaaaatatgtag |
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Protein
| Protein ID | pfu_aug1.0_7176.1_09504.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7176.1_09504.t1 MPPGPKPWPVIGNLPHIVGQDLHIALLKLSKNFGKMFWLKLAGEEVLVVNNMDAAVACFVRQGKIFSGRPKKSKSVDVML GDGLDIVMNDLSPELKFHRKIVHSFLASQTNSGKDRLERILLREADSFQETLRNLHQNKTCFDPKFHVARVVANVLSQCI LNHRFDDVDEEFHEQLRIVQDIVDNIESFNIVDIFPWLEHLPIPSWRRYLKSLEKKDRWIFNVIQKHRESPAESGHKDLV DLMLEHQKAAIEKNDTKQTKLLKDTNIGHIVHELFGGGIESTTMSILWFILYLIRHPEDTGYVLGQPLLKCPFSFSVLVW SQNTSSLFPMEKDYLIRRLTLDYRTDQNLSQSSLLKDEGKGGQGYPKSLIIKIGELPVVYLHYFRFRFNENM |
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