Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7184.1_31349
Locus scaffold7184.1 : 2396 ... 20708 : +
To GenomeBrowser scaffold7184.1:2396..20708
Genes list of scaffold scaffold7184.1
Synonym pfu_aug2.0_15.1_16711

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7184.1_31349.t1 3 1 MFS_1 97 111 9.2e-10 37.7 0.26 3900.0 -3.8
pfu_aug1.0_7184.1_31349.t1 3 2 MFS_1 231 367 9.2e-10 37.7 3.4e-08 0.00051 18.8
pfu_aug1.0_7184.1_31349.t1 3 3 MFS_1 265 451 9.2e-10 37.7 1.9e-12 2.8e-08 32.8

Transcript
Transcript IDpfu_aug1.0_7184.1_31349.t1
Definition-
>pfu_aug1.0_7184.1_31349.t1
atgacaaatatggataatgaccatatccctgtttaccgtgcaaaatcgacaattcagaaaatcagaaaccgaggcatacg
aaatcaggataaaacaggaacaaaagcaaataaacaaaaacctccaccatatgaaaagaagcgaactcccgatatgagag
tgagaccaggtgcccaggaagaaaagaaactgaatgcttcggatgtcttagataagataattcaggtgccaagggatgtg
atttgcaaatttgatggtgaaacggaacgatctcatattccttacttcatgtattggcgttcgtacttcctgttctggtg
cggcttctttggcgagattgttggaacttgcaaagaagaaaatgacataagcaaaaataaacagacaacgcagaacacta
tagaaaaacatgaagttcatctgccagtattattatcaagaaaagatctattttccagtttgtcaacaatgtcggcacat
agtgcctacagtgacactggaagcaggaatatctcattccgaggcagtgcatatagtctgcaagctatccaaacctctga
tacaggggcatttatcgtgactaaattaaacgaaataggttatcccaagaaaccgtgtatagctgcaccaatcaaaattt
tacagaaaatcgaaaaagaggaatccgaaaaagaaaataacctactcatgatggacactgaagaggaatcagaagcaaac
cagaaactggataatttgaataagaaatggttggatgtgacactgctgaaagatatacgtttcctaactttttgtatagg
tattgggttatacactttttctttccaagcatcatatgtgttcattccggcattagcaatccaaaagaacatgtctcatt
tacaagcagcctatattgtgtctattgccgggggcctagagacactaggcagtatcatctcaggaatttttctagatctt
ccctctattcgaccgcataggcttaatttatacaattttacgatgttcctgttaggtgctttgacttttctcatgcctat
tgtacaacattttatatcattatcatttgtttgtggagtatacgggtttttgcttgggtcatgtcttgctcaaaaggcga
cccttgtggtggacattctcggagtggagaatattgtgagttctataggacttttagtgtgtttccagggatttggagtt
ctgattggacctcctctttcaggatttcttcgtgatacaacaggtttatacgacgagggattttacctgggaggagcaac
catggttgccagtggagcggtacaatgttttggttccttctggtattggctgaaacaacgtaataaaaagagcgaaataa
attga

Protein
Protein IDpfu_aug1.0_7184.1_31349.t1
Definition-
>pfu_aug1.0_7184.1_31349.t1
MTNMDNDHIPVYRAKSTIQKIRNRGIRNQDKTGTKANKQKPPPYEKKRTPDMRVRPGAQEEKKLNASDVLDKIIQVPRDV
ICKFDGETERSHIPYFMYWRSYFLFWCGFFGEIVGTCKEENDISKNKQTTQNTIEKHEVHLPVLLSRKDLFSSLSTMSAH
SAYSDTGSRNISFRGSAYSLQAIQTSDTGAFIVTKLNEIGYPKKPCIAAPIKILQKIEKEESEKENNLLMMDTEEESEAN
QKLDNLNKKWLDVTLLKDIRFLTFCIGIGLYTFSFQASYVFIPALAIQKNMSHLQAAYIVSIAGGLETLGSIISGIFLDL
PSIRPHRLNLYNFTMFLLGALTFLMPIVQHFISLSFVCGVYGFLLGSCLAQKATLVVDILGVENIVSSIGLLVCFQGFGV
LIGPPLSGFLRDTTGLYDEGFYLGGATMVASGAVQCFGSFWYWLKQRNKKSEIN

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495