Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7197.1_45605
Locus scaffold7197.1 : 16270 ... 27526 : -
To GenomeBrowser scaffold7197.1:16270..27526
Genes list of scaffold scaffold7197.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7197.1_45605.t1 1 1 Malectin 1 45 1.9e-06 27.7 6.5e-10 2.4e-06 27.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7197.1_45605.t1 gi|346473559|gb|AEO36624.1| 7.0e-12

Transcript
Transcript IDpfu_aug1.0_7197.1_45605.t1
Definition-
>pfu_aug1.0_7197.1_45605.t1
gtttttgatgtgatgttgaacaaggaattatccattgtagaggacctcgacatcttcgctaaagtcggcaggggtgttgc
tcacgatgaaattgtacagttttctgttgttaatggaaatctcaaagtcaacgatgaaatatcacgcatggatggaaaat
tggcgttagaatttgtaaagatgttccaaagcttccaccactacctggactcgagacggaaagagaggaagaagaggaag
aggatgaagatgttaatgattcaaaatcatcgaaatctcgtcgtccttccggaccaaaagtag

Protein
Protein IDpfu_aug1.0_7197.1_45605.t1
Definition-
>pfu_aug1.0_7197.1_45605.t1
VFDVMLNKELSIVEDLDIFAKVGRGVAHDEIVQFSVVNGNLKVNDEISRMDGKLALEFVKMFQSFHHYLDSRRKERKKRK
RMKMLMIQNHRNLVVLPDQK

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