Gene
| Gene Model ID | pfu_aug1.0_72134.1_34823 |
|---|---|
| Locus | scaffold72134.1 : 2676 ... 3637 : + |
| To GenomeBrowser | scaffold72134.1:2676..3637 |
| Genes list of scaffold | scaffold72134.1 |
| Synonym | pfu_aug2.0_278.1_27149 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_72134.1_34823.t1 | 1 | 1 | Sep15_SelM | 69 | 122 | 2.1e-17 | 62.6 | 2.5e-21 | 3.7e-17 | 61.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_72134.1_34823.t1 | gi|242007350|ref|XP_002424504.1| | 15 kDa selenoprotein precursor, putative [Pediculus humanus corporis] | 2.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_72134.1_34823.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_72134.1_34823.t1 atgtgcagttcttgtaatgaactagatcagtttaatctgtcgtccttgaaagagagttgtcagaaatgttgttctagtga ttcagatggagaagagtcattgaaggtatgtattacatgttgtctttcaaatgtaatattactacatacccatatgcaga actgcatgtgtgcggatgaaaattgggaaggtttccacaagtccaagagtgaccgtcctaagcagtttcctggtttggcc atcaggtacgtacgaggtgccgaccccatcataaagctgatggacgagaacagggtcatcgtggaggaactcggtattga caaatggaacacggacagtgtggaagccttcttccaagaaagactacgcagataa |
|
Protein
| Protein ID | pfu_aug1.0_72134.1_34823.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_72134.1_34823.t1 MCSSCNELDQFNLSSLKESCQKCCSSDSDGEESLKVCITCCLSNVILLHTHMQNCMCADENWEGFHKSKSDRPKQFPGLA IRYVRGADPIIKLMDENRVIVEELGIDKWNTDSVEAFFQERLRR |
|