Gene
| Gene Model ID | pfu_aug1.0_7216.1_31350 |
|---|---|
| Locus | scaffold7216.1 : 86 ... 4165 : - |
| To GenomeBrowser | scaffold7216.1:86..4165 |
| Genes list of scaffold | scaffold7216.1 |
| Synonym | pfu_aug2.0_540.1_00869 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Best hit to MgC1q53. 71 bits, 8e-11 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7216.1_31350.t1 | 1 | 1 | C1q | 15 | 141 | 2.0e-16 | 60.1 | 1.5e-20 | 2.3e-16 | 59.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7216.1_31350.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7216.1_31350.t1 atgcaaacacccggcaaatctgttcttccagcagtgtcgttctttgctacctacgacagacgtggatatattttagcttt gaacgaaactgccatatttaccagagtactcagcaatgtcggaggtggatatgacgtcactacaggtaattttgtggctc cataccgcggtatctactccatatcagccactattatgagtgaaaacgacagtgacatccatattggcgtaatgaagaat gagaagctactgatgactctttacagcaatcgtaacacttacccacaatcctccgctacagttcatcttccgctggacat taacgacaggatatatctgatcagtaccttaaggccaaacaaaaaactgcatgtcttcccaaattcaccaaatttttaca atgctttttctggagctctcgttgttcttttatga |
|
Protein
| Protein ID | pfu_aug1.0_7216.1_31350.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7216.1_31350.t1 MQTPGKSVLPAVSFFATYDRRGYILALNETAIFTRVLSNVGGGYDVTTGNFVAPYRGIYSISATIMSENDSDIHIGVMKN EKLLMTLYSNRNTYPQSSATVHLPLDINDRIYLISTLRPNKKLHVFPNSPNFYNAFSGALVVLL |
|