Gene
| Gene Model ID | pfu_aug1.0_7219.1_24175 |
|---|---|
| Locus | scaffold7219.1 : 1 ... 15614 : + |
| To GenomeBrowser | scaffold7219.1:1..15614 |
| Genes list of scaffold | scaffold7219.1 |
| Synonym | pfu_aug2.0_10.1_00034 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7219.1_24175.t1 | 1 | 1 | Ras | 14 | 92 | 1.9e-09 | 37.1 | 4.5e-13 | 2.2e-09 | 36.8 |
| pfu_aug1.0_7219.1_24175.t1 | 1 | 1 | Miro | 21 | 89 | 2.0e-10 | 41.1 | 5.6e-14 | 2.8e-10 | 40.7 |
| pfu_aug1.0_7219.1_24175.t1 | 1 | 1 | EF_assoc_2 | 121 | 193 | 2.6e-27 | 94.3 | 9.2e-31 | 4.6e-27 | 93.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7219.1_24175.t1 | gi|57525262|ref|NP_001006208.1| | mitochondrial Rho GTPase 1 [Gallus gallus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_7219.1_24175.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7219.1_24175.t1 gtgccggctaaagctgaggagatcaccattccagccgatgttactccagaacatgtccccacccacattgtagattatag ctcccaggagcaagatgaggagagtctacaagaagaaattaacaaggccaatgttgtgtgtattgtttattctgtggagg acgaggactccattgaaaaaattacaacatactggttgccttacatcagagctcagctgggagaggatcataaaaccccc gttatacttgtcgggaataagtctgatctcttagatttcagcatagaagagatttgtgatttagacaatgactccatttt aaatgatgatgaagtacacttatttcagcggaaatgttttaatgctccccttcatcaacaagccctggacgatgtcaagt ctatagtcaaaaggaatataacggaaggagtcatagacaatggaatagctctcaaaggcttcctttttcttcatacatta tttattcagaggggacgtcatgagacaacatggacggtgttaagggcctttggttatgatgacaatctacaattaaccag agattacttatctccaaagtag |
|
Protein
| Protein ID | pfu_aug1.0_7219.1_24175.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7219.1_24175.t1 VPAKAEEITIPADVTPEHVPTHIVDYSSQEQDEESLQEEINKANVVCIVYSVEDEDSIEKITTYWLPYIRAQLGEDHKTP VILVGNKSDLLDFSIEEICDLDNDSILNDDEVHLFQRKCFNAPLHQQALDDVKSIVKRNITEGVIDNGIALKGFLFLHTL FIQRGRHETTWTVLRAFGYDDNLQLTRDYLSPK |
|