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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7246.1_67662
Locus scaffold7246.1 : 21016 ... 36434 : +
To GenomeBrowser scaffold7246.1:21016..36434
Genes list of scaffold scaffold7246.1
Synonym pfu_aug2.0_3533.1_12481

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7246.1_67662.t1 gi|270266165|gb|ACZ65015.1| PspC, partial [Streptococcus pneumoniae] 1.0e-16

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 7
>Adult tissues
Dshape 1
adductorMuscle 2

Transcript
Transcript IDpfu_aug1.0_7246.1_67662.t1
Definition-
>pfu_aug1.0_7246.1_67662.t1
atgggcctgtggtctagttgtgcacctgatattttgtttgagcccctgacccccagggtctttgaaaatgggagtgggtg
taaccatataggagttaaaccttgtccagagcgtaaccatataggagttaaaccttctccagatcgtaaccatgtaggag
ttaaaccatatcaagagtgtaaccatataggagttaaaccatatcaagagcgtaaccatataggagttaaaccatatcca
gatcgtaaccatataggagttaaaccatatcaagagtgtaaccatataggagttaaaccatatcaagagtgtaaccatat
aggagttaaaccatatcaagagtgtaaccatataggagttaaaccatatcaagagtgtaaccatataggagttaaaccat
atcaagagtgtaaccatataggagttaaaccttctccagatcgtaaccatataggagttaaaccatatcaagagtgtaac
catataggagttaaaccatatcaagagcgtaaccatataggagttaaaccatatccagatcgtaaccatataggagttaa
atcttatccagatcgtaaccatataggagttaaatcttatccagattgtaaccatataggagttaaatcttattcagatc
gtaaccatataggagttaaatcttatccagaacgttattgctcaaccattgcattgccaaatcataagaaggaacttgac
tccagagcaaacgtcattgtccaacaaagaaggtag

Protein
Protein IDpfu_aug1.0_7246.1_67662.t1
Definition-
>pfu_aug1.0_7246.1_67662.t1
MGLWSSCAPDILFEPLTPRVFENGSGCNHIGVKPCPERNHIGVKPSPDRNHVGVKPYQECNHIGVKPYQERNHIGVKPYP
DRNHIGVKPYQECNHIGVKPYQECNHIGVKPYQECNHIGVKPYQECNHIGVKPYQECNHIGVKPSPDRNHIGVKPYQECN
HIGVKPYQERNHIGVKPYPDRNHIGVKSYPDRNHIGVKSYPDCNHIGVKSYSDRNHIGVKSYPERYCSTIALPNHKKELD
SRANVIVQQRR

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