Gene
| Gene Model ID | pfu_aug1.0_726.1_22269 |
|---|---|
| Locus | scaffold726.1 : 122153 ... 136925 : - |
| To GenomeBrowser | scaffold726.1:122153..136925 |
| Genes list of scaffold | scaffold726.1 |
| Synonym | pfu_aug2.0_614.1_14388 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_726.1_22269.t1 | 3 | 1 | WD40 | 414 | 443 | 2.1e-06 | 27.4 | 0.0032 | 24.0 | 5.0 |
| pfu_aug1.0_726.1_22269.t1 | 3 | 2 | WD40 | 449 | 479 | 2.1e-06 | 27.4 | 8.7e-05 | 0.65 | 9.9 |
| pfu_aug1.0_726.1_22269.t1 | 3 | 3 | WD40 | 490 | 523 | 2.1e-06 | 27.4 | 1.1e-05 | 0.082 | 12.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_726.1_22269.t1 | gi|326675763|ref|XP_003200426.1| | 5.99756e-43 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_726.1_22269.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_726.1_22269.t1 atgtatgataagctggaaacccagatggaggaccttcaccttgaagaactctcgccagatgtacagctacaaatagctca attgatagaagcagacattaaacctgatattaatgagttagagatggcactgttccgtgattcaacaaaagcgacagctg atattagtaaggagcttcataggatggacagtaatgaaatatcatccaccacacctacatctacttcatctgtatcaaca aagaaatctacattactagaccaggctgtggatcagttccaagaattaaatgccattttagaaaatgaaaatcgcagaag atctcggacattatcaggcggtgaagatcatacgcctgttgttaattcaggaagatcgcctctgtctgtggacaacgttc aaataaaacaagaacctatggacagtggctacgggaattcaagtagcggcttacagtctgggtctgataaaggtttagat tatggtggatcagctgttgtctcatctagtggtgtcagtgacatggacacaggggaagcaccaagagacgaaatcggcga aaaaacccaaaatgatcctcctacttctactatcccatctggagagatttctacttcttttactattattgtagatgtct ctgcaccaccgtctgtttctagtagccactcagcagagagtatttttgatacaatgtacgatatgagtgtgaaggaggag acgataaggaatgagctgaaggatgtgtatggacagatagactaccttaaaaaggttatagaggaggcatctatacaact caataggtacacagagaagaaaatcagacaacttcaggatttatcttcgtccctgagagacgatgtacaaaaagcatcaa gtcaggcctcacctaatcgtgatgactcatactttggatctgttgatagagcaagtagcaagaaagggaaaaataaacat gtcgactccgatcaaatttcagtcaactgtgatatgaggaagaacaatataacaggtgctctgtcacctgaagtactaag agaacaagaagatacttcagcagtaaaatcttctcttccgacaggtgagatctgccacaaagaggagactgagggtaata tacagtgtttacatgaagactgggggaaactattcctgggaaccgactgtggaactgtcattgttaaaaaactcaaggtt caaaacaacaagactttggataccttcctatgtacagacagagctataagctgtataacatccgcacggcagggtagtca gaagatgttagtgattggttcctttgatgctgttatctatgtttatgactcgtcatcgggcctccttattcacatgttag aagggcacacccatacaccattttctatacaggtagtagaacagtcagtgtacagtggctcaggggataaaactgtcatg gaacataatcttatgacaggggagctgatatggatctgtaacgatgccagcagtatagtatctaatgtggccgtctctag tgacatgttattctctgcttcctatgatagatacattaggtgttatgacttaaagataattgacaatattttacagagta agaagttaagtaaggtgttttatggagcagacattgggctggtgacaaagatgttggtacaagatggcaagcttataact ggtaatcgtaaaggtatagtggagtccatacagatctcatcgtctaacgagtttccgtgtcagcaaaatgattgtgattt catatttggactgagatctcacttggagcatcatgcagtgcatggccatttaatgttaaatgacaaagtattccattgta tgtggaatggatgtaacaccaagattcctgtagataaagatagaaaggaggcagagtcccatatgaagagccacatcatc taa |
|
Protein
| Protein ID | pfu_aug1.0_726.1_22269.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_726.1_22269.t1 MYDKLETQMEDLHLEELSPDVQLQIAQLIEADIKPDINELEMALFRDSTKATADISKELHRMDSNEISSTTPTSTSSVST KKSTLLDQAVDQFQELNAILENENRRRSRTLSGGEDHTPVVNSGRSPLSVDNVQIKQEPMDSGYGNSSSGLQSGSDKGLD YGGSAVVSSSGVSDMDTGEAPRDEIGEKTQNDPPTSTIPSGEISTSFTIIVDVSAPPSVSSSHSAESIFDTMYDMSVKEE TIRNELKDVYGQIDYLKKVIEEASIQLNRYTEKKIRQLQDLSSSLRDDVQKASSQASPNRDDSYFGSVDRASSKKGKNKH VDSDQISVNCDMRKNNITGALSPEVLREQEDTSAVKSSLPTGEICHKEETEGNIQCLHEDWGKLFLGTDCGTVIVKKLKV QNNKTLDTFLCTDRAISCITSARQGSQKMLVIGSFDAVIYVYDSSSGLLIHMLEGHTHTPFSIQVVEQSVYSGSGDKTVM EHNLMTGELIWICNDASSIVSNVAVSSDMLFSASYDRYIRCYDLKIIDNILQSKKLSKVFYGADIGLVTKMLVQDGKLIT GNRKGIVESIQISSSNEFPCQQNDCDFIFGLRSHLEHHAVHGHLMLNDKVFHCMWNGCNTKIPVDKDRKEAESHMKSHII |
|