Gene
| Gene Model ID | pfu_aug1.0_7274.1_09520 |
|---|---|
| Locus | scaffold7274.1 : 11116 ... 29784 : + |
| To GenomeBrowser | scaffold7274.1:11116..29784 |
| Genes list of scaffold | scaffold7274.1 |
| Synonym | pfu_aug2.0_4426.1_22559 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Pfu-000058 |
| Description | NCBI blastx best hit to XP_001921732.1. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7274.1_09520.t1 | 2 | 1 | VWD | 2 | 152 | 2.1e-34 | 119.0 | 7.8e-28 | 2.3e-24 | 86.3 |
| pfu_aug1.0_7274.1_09520.t1 | 4 | 1 | TIL | 287 | 338 | 1.6e-08 | 34.5 | 5.2e-12 | 1.6e-08 | 34.5 |
| pfu_aug1.0_7274.1_09520.t1 | 4 | 2 | TIL | 393 | 418 | 1.6e-08 | 34.5 | 0.82 | 2400.0 | -1.3 |
| pfu_aug1.0_7274.1_09520.t1 | 4 | 3 | TIL | 414 | 432 | 1.6e-08 | 34.5 | 0.81 | 2400.0 | -1.3 |
| pfu_aug1.0_7274.1_09520.t1 | 4 | 4 | TIL | 499 | 537 | 1.6e-08 | 34.5 | 0.47 | 1400.0 | -0.6 |
| pfu_aug1.0_7274.1_09520.t1 | 2 | 2 | VWD | 537 | 613 | 2.1e-34 | 119.0 | 9.6e-12 | 2.8e-08 | 34.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7274.1_09520.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7274.1_09520.t1 atgtgcagtgctcgaggggatccacattatgtaacatttgacggcagaaagatccatttccaaggcaactgtaaatacgt acttgcccggtccacacatccggattgtaggttagaggtcactgtgaagaatgaacatcgctcaaaacgctccgttacct ttacaagagagctcgactttacgtacaatgggattactttacggcttttacctgaaaggaaactaaaagtcgatggattg gaaacagatccttgtaactatgtaagcccggatggatctatcagtattaactgtgctgggaacgtcctgcgtgtggtgac aaatccttgtggaagcatcttagaatggagtggaggacattctgcccaaatcatgatccctaaaatttatgccggaggaa ataatttatctgggatctgtggtaactgcaatggtgatccaagtgacgacatgatttctcaatttagacgcgatgtagct aatgaggaaaatgcagatcacaagttcgggagtagctggcaggttgctgatgactctgacattaaggatcaagaagtatg tacagatgaattttttcccataccaaaatgtactgaaaacaccaagttagctgccgctgctccggataattgtggaattc tagatcctagtatagatggaccgtttaaagaatgcttagtggaagcagacattaagctcaaggagtacgaagactgcgtt tttgactattgccttttttcagatgagcgacaggaattattcaaagaggctgtctgcagcatgcataataacttgagaca actttgcaatgatttcggatataatatcacttggagcgatccaaactgccccattcaatgtggtaaaaacgaagagtact atgacacgatgtctgggtgccaaccaacgtgtagaaaccccaaccccaaaaaatgtaagctgccagcatcaagtggatgc ggatgcaagaaaggttatgttctcggtgccctggggcagtgtgtacacaggaatacagaatgtggatgtttatatgatac ggatggaagatactacccgcttggagcaacattcacaactcctgattgcaaaatggttaaagaatgcaaagtacacgcac ggaaatcaagaattatgacaatacaggatatgggaccttgctctgaatttggtttttgtactaatgaggatggtgacttc aagtgtgtatgtcagcatggaatgaagggagatgggcgaacttgtacccctgactgtagcggtgaagttcactatgtcga taagacatgtacaagtcagccaaataagaggaaaacatgtggaatacccgaagctagtagaattgtttccattgagctga aggagcagcactccgaaacagaatgtataaaagacgaaacgttttggctatggaatggaagagataataaacacaggttt ttagttagagctggatgtagcggaacgtttactttgggcttctatctaaaagatgcatgcactgaaacatgtggaactaa tgcctacttcaatagtcgaaagcagaaatgtgaatgcaggaaaggtttttacggtgacccgaaggcgtcatgcaacagga tgtgcgtgtgccgtgcctcaggagaccctcactaccgcacgtatgatggtcaaacaatacacttcatggggacttgcaaa tacacattgtcacgtctgctagatacagccgatccttgttatttcaatgttgaagtaaaaaatgagagacgctatggtaa taatcgagtaactcacacgagacttgtggatctaaaaatgcatggagcaacagtcaggctcatgaaggacaggaaagtta tgcgtgggtcctgtagcatcatatcccattcattctgctacgtctttcgacgatttacatccaaacatcacattcgacat acaaaacctcgaaaaatacaacacaaaagataa |
|
Protein
| Protein ID | pfu_aug1.0_7274.1_09520.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7274.1_09520.t1 MCSARGDPHYVTFDGRKIHFQGNCKYVLARSTHPDCRLEVTVKNEHRSKRSVTFTRELDFTYNGITLRLLPERKLKVDGL ETDPCNYVSPDGSISINCAGNVLRVVTNPCGSILEWSGGHSAQIMIPKIYAGGNNLSGICGNCNGDPSDDMISQFRRDVA NEENADHKFGSSWQVADDSDIKDQEVCTDEFFPIPKCTENTKLAAAAPDNCGILDPSIDGPFKECLVEADIKLKEYEDCV FDYCLFSDERQELFKEAVCSMHNNLRQLCNDFGYNITWSDPNCPIQCGKNEEYYDTMSGCQPTCRNPNPKKCKLPASSGC GCKKGYVLGALGQCVHRNTECGCLYDTDGRYYPLGATFTTPDCKMVKECKVHARKSRIMTIQDMGPCSEFGFCTNEDGDF KCVCQHGMKGDGRTCTPDCSGEVHYVDKTCTSQPNKRKTCGIPEASRIVSIELKEQHSETECIKDETFWLWNGRDNKHRF LVRAGCSGTFTLGFYLKDACTETCGTNAYFNSRKQKCECRKGFYGDPKASCNRMCVCRASGDPHYRTYDGQTIHFMGTCK YTLSRLLDTADPCYFNVEVKNERRYGNNRVTHTRLVDLKMHGATVRLMKDRKVMRGSCSIISHSFCYVFRRFTSKHHIRH TKPRKIQHKR |
|