Gene
| Gene Model ID | pfu_aug1.0_728.1_58225 |
|---|---|
| Locus | scaffold728.1 : 1 ... 26085 : + |
| To GenomeBrowser | scaffold728.1:1..26085 |
| Genes list of scaffold | scaffold728.1 |
| Synonym | pfu_aug2.0_52.1_06838 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_728.1_58225.t1 | 7 | 1 | Cadherin_2 | 5 | 29 | 7.2e-13 | 47.9 | 0.025 | 94.0 | 2.6 |
| pfu_aug1.0_728.1_58225.t1 | 10 | 1 | Cadherin | 7 | 47 | 0.0 | 391.5 | 1.1e-10 | 4.1e-07 | 30.1 |
| pfu_aug1.0_728.1_58225.t1 | 10 | 2 | Cadherin | 72 | 169 | 0.0 | 391.5 | 1.6e-18 | 6.1e-15 | 55.2 |
| pfu_aug1.0_728.1_58225.t1 | 7 | 2 | Cadherin_2 | 104 | 133 | 7.2e-13 | 47.9 | 0.011 | 42.0 | 3.8 |
| pfu_aug1.0_728.1_58225.t1 | 10 | 3 | Cadherin | 207 | 290 | 0.0 | 391.5 | 4.2e-07 | 0.0016 | 18.6 |
| pfu_aug1.0_728.1_58225.t1 | 10 | 4 | Cadherin | 337 | 430 | 0.0 | 391.5 | 3.6e-22 | 1.3e-18 | 66.9 |
| pfu_aug1.0_728.1_58225.t1 | 7 | 3 | Cadherin_2 | 371 | 401 | 7.2e-13 | 47.9 | 0.2 | 760.0 | -0.3 |
| pfu_aug1.0_728.1_58225.t1 | 10 | 5 | Cadherin | 447 | 532 | 0.0 | 391.5 | 8.4e-12 | 3.1e-08 | 33.7 |
| pfu_aug1.0_728.1_58225.t1 | 7 | 4 | Cadherin_2 | 491 | 519 | 7.2e-13 | 47.9 | 0.012 | 44.0 | 3.7 |
| pfu_aug1.0_728.1_58225.t1 | 7 | 5 | Cadherin_2 | 539 | 558 | 7.2e-13 | 47.9 | 0.073 | 270.0 | 1.2 |
| pfu_aug1.0_728.1_58225.t1 | 10 | 6 | Cadherin | 541 | 587 | 0.0 | 391.5 | 6.7e-13 | 2.5e-09 | 37.2 |
| pfu_aug1.0_728.1_58225.t1 | 7 | 6 | Cadherin_2 | 600 | 663 | 7.2e-13 | 47.9 | 2.2e-06 | 0.0083 | 15.6 |
| pfu_aug1.0_728.1_58225.t1 | 10 | 7 | Cadherin | 603 | 695 | 0.0 | 391.5 | 8.1e-24 | 3.0e-20 | 72.2 |
| pfu_aug1.0_728.1_58225.t1 | 10 | 8 | Cadherin | 716 | 807 | 0.0 | 391.5 | 7.3e-12 | 2.7e-08 | 33.9 |
| pfu_aug1.0_728.1_58225.t1 | 10 | 9 | Cadherin | 831 | 885 | 0.0 | 391.5 | 1.9e-12 | 7.2e-09 | 35.7 |
| pfu_aug1.0_728.1_58225.t1 | 10 | 10 | Cadherin | 901 | 988 | 0.0 | 391.5 | 2.0e-09 | 7.3e-06 | 26.1 |
| pfu_aug1.0_728.1_58225.t1 | 7 | 7 | Cadherin_2 | 954 | 975 | 7.2e-13 | 47.9 | 0.00033 | 1.2 | 8.7 |
Transcript
| Transcript ID | pfu_aug1.0_728.1_58225.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_728.1_58225.t1 acggtggatgatgcatacaggaatgcattcaggatagatcccaatcatggagatatcatcgtcaatggtccattggatta cgagaaacataatttttatgaattcattatcaaagccaaggatggatacggtgaagagagtaaagtgaatgcagattttg tattgaccattatggacatacaagacacgcccccagccttctataacctaccgtacagtattgttatgccagaggacaaa cctgtcggtggaagtgtcctacaagtgacagcattagatggtgataggggaaatccaaacagcattacatacagatttgt ttcaggtaattttgagaactttgggattaattcgtcgacgggtctgatcacagtccgccaaactttggacagagatgatc ctgccgtacagctgagagggggagtttatgctatgtatgtagaggcttcagaagtgaccaccgctggcggtaacacctcg gccactacattggttacagtcaccgtatccgacataaacgacaatgcaccacagttcagcagcgtccaatacgaagccac cataccagagcacatggacgacggagtgccgataaagtttataggtgccaacactatactatctgtcagtgataaagacc agggctctaacagtcattttgaactgacattaatgcagaacaatcagccctactatgacttctctccccttccaccagag gggttctcagaatcatcagtgcttatacgggtcaataactcaggaaacttagattttgaaaagatgaaccaaactacatt tcagattgtagcacgtgagataggaaccagtgaaagacgtagcagtaccgctactataactgtatttatagaggatatga acgacaaccagccagaatttgatcaaacctcctacctcgcttacatagctgagaatgttagtccgggagctaacgtaaca agggtgcatgatgaaaatgacaatgttcctctctttgagcaaacatcatacattgcctctctgccagaaaacactacaga tgccactgtggcacttacagtgacggcacatgatgccgacggcaccgcaccaaacaatgagtttgtataccgcatagaca gcggtgctcaggataaattcagaattaactttagaacgggagaaatcagtgtggaagtaggtgccaaactgaacagagaa gaaaaaagtacttacatactcaatatatccgcgacagatagaggtgcagtttcgttagtcgggcattgtgtcgtcactat aaacgtgactgatgtaaatgattacgtgccagtattcaatcctgaatctcaagaaaaatctatacatgagaccttgtcag taaatagtcctgtacttacctacacagccactgaccttgaccttgataagaatctacaatacagtattacgtctgtaaaa gccgaggatgacgatggaaacgatgtagatgtgactacaattggagttcaggattattttggtatagttcccaccaatgg tacaatatacgtgaaaactccactagacagggagacggctgaggtgatcacattaaaaatactagtgaaagatctaaacg catgggaaccccctgtaaatctgcaaacagctacaggtacagtaaggttaaggaggagactggacagggagactgagcct caggtaacatttacaatcctggccagagataatggtaacccagtccgtacatccaccgccacggtacatgttactgtcac cgacaccaatgacaactctcctatgttcaatacataccagcttacatactctgtgtctgaagatgctccaaatggcactg aaatcgccgttattgatgccacagacaaagacgagggtgacttcgccaaaatccaatattccatggagatttctaacaat gatgactgctttagtatagatccagatacgggtagagtcattgtacgtaaaagattggactttgaacagaccagaactta cagtatatatgtgaaagctacggacaatcctgatgacgataccaatcagcgtactacacagactcaagccatacaaatca acgttaacgatgtcaacgacaaccctccaaccattgtcaacagtggcaagaaacccaaaattatactggaaaatgctcaa attgatactgttgtggaaaccgtgtcagccaccgacccggataacggtgataacggtacggtagagtaccagctggttac cacggataccaacgctagtataagctggttcagtatcagtactgtgtataacccagataaaggtgccaacgaaggcgtca taatattgaaagaaaacttactaagtagagttggtatatactatgtgaccgtgagagccatagataagggaacaccttac agactgtcgtccaatagaactctgctatttgaggttgtagatgtgaacttacaccaacctcagttcgtggtacctcgagg acctcaggcaaccatacagataaaagaggaacagccaattggtactcaggtacttgttgtcagtgctagtgacgaagacc atgggaagaatgcagaggttcactattacctgtctccagagaaagactaccagaagttcaatctggaccccaacactgct atattgacgataacccttctagatgataacgataatgatcccaagttccaatactcagtttacaacgtcaacgtctcgga gggcagagatatccttgacaacattctcaccgtcatggcaacagacgctgatcgtaatcaactcatatcgtacagcatcg gtgacgacagtacaaactcatttgaaattgtaaatcctaacagtggtggagacatgctccaacattttgagttgaacaga acaaatggtgacctctatctcatcaagtccattgacagggaaaacggtggtggagctccgattaacttcgtcaaccttgt gatatgggcctcacccatcaatcgtttaagtgacacgccatctcaacgtagaaaacgttctttagactcggacattatcc agaggtcaaaaaggtcaacaccacctaacatcccaccagcagactatgaccctacaaacaagacgcttctgtgggcacaa gttgttatacaggatgttaatgaccatcctccagaattcagatataaaaacctcagtattggtattactagaaaaacaca gtttggagaaattatattcaatttaaagcataatggcattccatacgaggtccaatgtcaaggtcaaagtcgacttgaaa gaattactggatacaaaattgttgtggataaaatccagacccatgaaaatgatcaagggaaaccagaagtagacaagaca gacatgtttatacatggcgaaagagagaatcccttcgccattgttgatgcagcagaactactaagtaaaattgattccaa agccacagaacttataccagtcctcaatgattacaatatccttcaaattgtgcctacgacaagccaggctctggaggagg attcatcacgtacactcattatggccatcatattattagctatacttttgggcataccctgtatcgtcatgataattgtc atatttcttataagacaaaaatatcaaaggaaacttaaagctgccacagcaatggcatatggtcaagactcagatttaca aaagctacagttgccggggaccaatatacatgcatatgagaagtaa |
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Protein
| Protein ID | pfu_aug1.0_728.1_58225.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_728.1_58225.t1 TVDDAYRNAFRIDPNHGDIIVNGPLDYEKHNFYEFIIKAKDGYGEESKVNADFVLTIMDIQDTPPAFYNLPYSIVMPEDK PVGGSVLQVTALDGDRGNPNSITYRFVSGNFENFGINSSTGLITVRQTLDRDDPAVQLRGGVYAMYVEASEVTTAGGNTS ATTLVTVTVSDINDNAPQFSSVQYEATIPEHMDDGVPIKFIGANTILSVSDKDQGSNSHFELTLMQNNQPYYDFSPLPPE GFSESSVLIRVNNSGNLDFEKMNQTTFQIVAREIGTSERRSSTATITVFIEDMNDNQPEFDQTSYLAYIAENVSPGANVT RVHDENDNVPLFEQTSYIASLPENTTDATVALTVTAHDADGTAPNNEFVYRIDSGAQDKFRINFRTGEISVEVGAKLNRE EKSTYILNISATDRGAVSLVGHCVVTINVTDVNDYVPVFNPESQEKSIHETLSVNSPVLTYTATDLDLDKNLQYSITSVK AEDDDGNDVDVTTIGVQDYFGIVPTNGTIYVKTPLDRETAEVITLKILVKDLNAWEPPVNLQTATGTVRLRRRLDRETEP QVTFTILARDNGNPVRTSTATVHVTVTDTNDNSPMFNTYQLTYSVSEDAPNGTEIAVIDATDKDEGDFAKIQYSMEISNN DDCFSIDPDTGRVIVRKRLDFEQTRTYSIYVKATDNPDDDTNQRTTQTQAIQINVNDVNDNPPTIVNSGKKPKIILENAQ IDTVVETVSATDPDNGDNGTVEYQLVTTDTNASISWFSISTVYNPDKGANEGVIILKENLLSRVGIYYVTVRAIDKGTPY RLSSNRTLLFEVVDVNLHQPQFVVPRGPQATIQIKEEQPIGTQVLVVSASDEDHGKNAEVHYYLSPEKDYQKFNLDPNTA ILTITLLDDNDNDPKFQYSVYNVNVSEGRDILDNILTVMATDADRNQLISYSIGDDSTNSFEIVNPNSGGDMLQHFELNR TNGDLYLIKSIDRENGGGAPINFVNLVIWASPINRLSDTPSQRRKRSLDSDIIQRSKRSTPPNIPPADYDPTNKTLLWAQ VVIQDVNDHPPEFRYKNLSIGITRKTQFGEIIFNLKHNGIPYEVQCQGQSRLERITGYKIVVDKIQTHENDQGKPEVDKT DMFIHGERENPFAIVDAAELLSKIDSKATELIPVLNDYNILQIVPTTSQALEEDSSRTLIMAIILLAILLGIPCIVMIIV IFLIRQKYQRKLKAATAMAYGQDSDLQKLQLPGTNIHAYEK |
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