Gene
| Gene Model ID | pfu_aug1.0_7309.1_02419 |
|---|---|
| Locus | scaffold7309.1 : 1 ... 5585 : - |
| To GenomeBrowser | scaffold7309.1:1..5585 |
| Genes list of scaffold | scaffold7309.1 |
| Synonym | pfu_aug2.0_447.1_24035 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7309.1_02419.t1 | 1 | 1 | Inositol_P | 15 | 115 | 4.3e-18 | 65.5 | 4.6e-22 | 6.8e-18 | 64.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7309.1_02419.t1 | gi|260791734|ref|XP_002590883.1| | hypothetical protein BRAFLDRAFT_285264 [Branchiostoma floridae] | 2.8026e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7309.1_02419.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7309.1_02419.t1 atgggactaggtggctttggctttttaagagaggtcccccctaaagataaacttatcgtcacaaccagtcgatcacattc taacatgttagtcacagagacggttcagtcattaaatcctaatgaggtagtacgtgtaggaggggctggtcataaggttc ttctgctgattgaaggcaaggtacacgcttatgtatttgcaagtaagggatgtaaaaagtgggatacctgtgcaccagag gcagtgctccatgcagtggggggatgtctcacagatttacatggcatcaagatgaattatgccaaagatgttcagaggca gaacacaggaggcgtgctggccaccctaatgaatgaagaagatcaccgcggtatcgtggcaaaaatacctgagcttgcta aagatgcgatggaacaaagctctccggctccaaagttagatttcatgggggccaaatttgggcagaatcctcagagagga tcagattccgaggagaaaagcaatattcctatcggcagcaataaagttccttcagaagagaagaaacaagcggtagacca gtcggctgttagccccacaccctccacagacagtcagggtaccacatctagtaaatcgtcacagctcagtgattctgtac agaaagagacttgtacaacaaagctttag |
|
Protein
| Protein ID | pfu_aug1.0_7309.1_02419.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7309.1_02419.t1 MGLGGFGFLREVPPKDKLIVTTSRSHSNMLVTETVQSLNPNEVVRVGGAGHKVLLLIEGKVHAYVFASKGCKKWDTCAPE AVLHAVGGCLTDLHGIKMNYAKDVQRQNTGGVLATLMNEEDHRGIVAKIPELAKDAMEQSSPAPKLDFMGAKFGQNPQRG SDSEEKSNIPIGSNKVPSEEKKQAVDQSAVSPTPSTDSQGTTSSKSSQLSDSVQKETCTTKL |
|