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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7309.1_02423
Locus scaffold7309.1 : 59340 ... 63335 : -
To GenomeBrowser scaffold7309.1:59340..63335
Genes list of scaffold scaffold7309.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7309.1_02423.t1 1 1 CRM1_C 2 88 1.3e-23 83.4 2.0e-27 1.5e-23 83.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7309.1_02423.t1 gi|348533275|ref|XP_003454131.1| PREDICTED: exportin-1-like [Oreochromis niloticus] 0.0

Transcript
Transcript IDpfu_aug1.0_7309.1_02423.t1
Definition-
>pfu_aug1.0_7309.1_02423.t1
atgcaggcgtccattctagcgtacatgttctcactactggagaatggcaaggtaactgtggcattggattccagcgcaca
ggcagcacagaatgtatcatatatacaatctttcctcatgaacctactcaaggcagctttccctcatcttaatgatgccc
agatcaaactgttcattgaaggattattcagctttgaccaagacatcccagctttcaaagaacatctcagagatttcctg
gtgcagattagggaatatgctggtgaagacaatcaggatttattcctagaggagagagagacagccattaaacaagccca
agaggagaaacggaaagtgcaattgtcagtgccaggaattctaggacctcacgagatacctgaagagatgcaagactga

Protein
Protein IDpfu_aug1.0_7309.1_02423.t1
Definition-
>pfu_aug1.0_7309.1_02423.t1
MQASILAYMFSLLENGKVTVALDSSAQAAQNVSYIQSFLMNLLKAAFPHLNDAQIKLFIEGLFSFDQDIPAFKEHLRDFL
VQIREYAGEDNQDLFLEERETAIKQAQEEKRKVQLSVPGILGPHEIPEEMQD

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