Gene
| Gene Model ID | pfu_aug1.0_7312.1_45630 |
|---|---|
| Locus | scaffold7312.1 : 9556 ... 16295 : - |
| To GenomeBrowser | scaffold7312.1:9556..16295 |
| Genes list of scaffold | scaffold7312.1 |
| Synonym | pfu_aug2.0_5856.1_22723 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7312.1_45630.t1 | 1 | 1 | BTB_2 | 18 | 104 | 1.6e-19 | 69.9 | 1.9e-23 | 2.8e-19 | 69.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7312.1_45630.t1 | gi|260821091|ref|XP_002605867.1| | hypothetical protein BRAFLDRAFT_90806 [Branchiostoma floridae] | 2.0e-32 |
Transcript
| Transcript ID | pfu_aug1.0_7312.1_45630.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7312.1_45630.t1 atgatgaaaaaattatcagataatctttttatattccagtttccctccgtcataagtcttaatgtaggaggaaggatctt tgctacaaggttgtcaacacttctacgttatccggactccatgttggctgtcatgttcagtggacgacatgtggttgata aggatggagagggtaattactttattgatagggacggtacttattttaaccatgtactaaattatcttaggaacgaccaa gacttaccaccggtcgcaattgcagaacaagttctcaaagaggcagtgttctatggtattcagtccttggtcgatcacct gaaaaactcgccaccactcttcgcagagtatgttgtgagacagaatattcgggaaaaagtagagaactatttagagtgca aggaactgatggttgagatggcgagagaacaggtacttgaaagtggtgcaataaattctgtggtcagactggtaacaagt aaaaatcagccaatccccagagacttacaattctcaaagcaagtatacaaacagtactataggaagtttcatacatataa atccttcgaatctgcgtacgggaaatatcacattcaccttccctgtgatcagttgaagggccatcctgacgtcgttatgg atcttgtagcaagctgcctacatcaggatctgttaaaggacggatacagagtaatattcctgtccgagggtgtccatgac gaggaccataaaatacggactgtgtcatggtgtgacgaggaattccacgtctgtagcagttgtcacatgttcagatttga ttggctggatgttcctctccagaggcctaacaactttcggccgtga |
|
Protein
| Protein ID | pfu_aug1.0_7312.1_45630.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7312.1_45630.t1 MMKKLSDNLFIFQFPSVISLNVGGRIFATRLSTLLRYPDSMLAVMFSGRHVVDKDGEGNYFIDRDGTYFNHVLNYLRNDQ DLPPVAIAEQVLKEAVFYGIQSLVDHLKNSPPLFAEYVVRQNIREKVENYLECKELMVEMAREQVLESGAINSVVRLVTS KNQPIPRDLQFSKQVYKQYYRKFHTYKSFESAYGKYHIHLPCDQLKGHPDVVMDLVASCLHQDLLKDGYRVIFLSEGVHD EDHKIRTVSWCDEEFHVCSSCHMFRFDWLDVPLQRPNNFRP |
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