Gene
| Gene Model ID | pfu_aug1.0_7320.1_45633 |
|---|---|
| Locus | scaffold7320.1 : 12776 ... 18850 : + |
| To GenomeBrowser | scaffold7320.1:12776..18850 |
| Genes list of scaffold | scaffold7320.1 |
| Synonym | pfu_aug2.0_35.1_16747 |
Manual annotation
| Study field | Transcription Factors |
|---|---|
| Gene name | Pfu-ID |
| Description | Best hit to NP_002157 DNA-binding protein inhibitor ID-2 [Homo sapiens] with 2e-20 by a BLASTP search against NCBI Homo sapiens nr database. This annotation is based on NJ, ML, and BI. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7320.1_45633.t1 | 1 | 1 | HLH | 36 | 74 | 2.0e-09 | 36.9 | 2.5e-13 | 3.6e-09 | 36.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7320.1_45633.t1 | gi|351712276|gb|EHB15195.1| | 2.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7320.1_45633.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7320.1_45633.t1 atgaaagccgtaacacagaacgtagtgagaccagtagagttcggaatcaagaaggattctccttgtagtaaagtcgtcaa gagtaaaatggatgaaacagcagaagaaatgcaggcttgtttcctgaagttgaaggaactcgtgccctccattccccagg ataggaagctctccaagacacagttattacaacacgtcattgactatatcttagacttggaagttgctctggattttaat cctgaagttcttaccaccgtccctccggcccctgggtcagctaacagatccccactccaggagaaagccgagccaaacaa catagtggacactcagggtcccacccccatggaggaggacagctgtgacaccaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_7320.1_45633.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7320.1_45633.t1 MKAVTQNVVRPVEFGIKKDSPCSKVVKSKMDETAEEMQACFLKLKELVPSIPQDRKLSKTQLLQHVIDYILDLEVALDFN PEVLTTVPPAPGSANRSPLQEKAEPNNIVDTQGPTPMEEDSCDTK |
|