Gene
| Gene Model ID | pfu_aug1.0_7323.1_52935 |
|---|---|
| Locus | scaffold7323.1 : 14006 ... 26696 : + |
| To GenomeBrowser | scaffold7323.1:14006..26696 |
| Genes list of scaffold | scaffold7323.1 |
| Synonym | pfu_aug2.0_511.1_04268 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7323.1_52935.t1 | 2 | 1 | zf-primase | 268 | 279 | 7.0e-15 | 54.3 | 0.45 | 6700.0 | -3.2 |
| pfu_aug1.0_7323.1_52935.t1 | 2 | 2 | zf-primase | 332 | 377 | 7.0e-15 | 54.3 | 4.7e-19 | 7.0e-15 | 54.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7323.1_52935.t1 | gi|260814063|ref|XP_002601735.1| | hypothetical protein BRAFLDRAFT_76045 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_7323.1_52935.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7323.1_52935.t1 atggatcgggagactattccatacattcactactcttgagaaaagaacatggcagatagtaaggtgccagcagagataac agaaaacaatgagacagaaagcaatgtgccctcagagataacggaaaacaatgagacagaaagcaatgtgccctcagaga tcagtgaaatagaagttgctttatcatcaactgaagaggagaatccattctttggcaaggatgtcggaaaagctgaacct acaaagaaacacaacaatgtagataaaaataccaaacaaaaaagccacgggagtcaagagaaaatgtcagaggacgtcac agctcagagtttgtttggggacagtgatagtgattgggatgagttagatggagataagccatggacactgtcagatacag gccaagagatcaggcagataatgaagaagggagacaaagagagagtgtctcatgctaataaatctgatgtacaggctctc agggataaagctgtcaaaccaaactcttggaaggatcgcccctttcttggacagaagcagatagatccatccccaaaaca ttcgtgcaaagaaaatgacatgccctcgattacagatcctttctctaacataagaattgtaaatcccaaagtgtcgtcct tggatatgaagatgaagatgcaggatcgtaagctattcaaattgtccactctaaatactaggccatcagctgacctacaa ggaaactgggtcactattggagtggtcatttataagtcagaacctcgcacatcagcatctggtaagaattactgcctttg gaagttaagtgatttgcagaactgtgatcaagtgataaccttcttcttgtttggagaagtgtacaaacagcactggaaga atgaagtcagcactgtggtaggattacttaaccccaacccaatggataaggctgaaaaggccagtaaagatgtagctttc acagtaaatcacccacatcagattctggtgatgggacactcaaaagacctgggcaagtgtgctggcacaaacagggcagg aaacgcctgtaccaacattattaacaagcagcatggggaattttgtacctaccatgtacaagctgcttataaaaggtcca gttctaaacgtacagaattacaaggaggattttag |
|
Protein
| Protein ID | pfu_aug1.0_7323.1_52935.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7323.1_52935.t1 MDRETIPYIHYSXEKNMADSKVPAEITENNETESNVPSEITENNETESNVPSEISEIEVALSSTEEENPFFGKDVGKAEP TKKHNNVDKNTKQKSHGSQEKMSEDVTAQSLFGDSDSDWDELDGDKPWTLSDTGQEIRQIMKKGDKERVSHANKSDVQAL RDKAVKPNSWKDRPFLGQKQIDPSPKHSCKENDMPSITDPFSNIRIVNPKVSSLDMKMKMQDRKLFKLSTLNTRPSADLQ GNWVTIGVVIYKSEPRTSASGKNYCLWKLSDLQNCDQVITFFLFGEVYKQHWKNEVSTVVGLLNPNPMDKAEKASKDVAF TVNHPHQILVMGHSKDLGKCAGTNRAGNACTNIINKQHGEFCTYHVQAAYKRSSSKRTELQGGF |
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