Gene
| Gene Model ID | pfu_aug1.0_7332.1_24198 |
|---|---|
| Locus | scaffold7332.1 : 3919 ... 19895 : - |
| To GenomeBrowser | scaffold7332.1:3919..19895 |
| Genes list of scaffold | scaffold7332.1 |
| Synonym | pfu_aug2.0_1557.1_24998 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7332.1_24198.t1 | 1 | 1 | MIT | 231 | 296 | 7.6e-13 | 48.1 | 2.1e-16 | 1.5e-12 | 47.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7332.1_24198.t1 | gi|291237668|ref|XP_002738756.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7332.1_24198.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7332.1_24198.t1 atggtaagtgatatcagagagtctcaagaagattccttggatggagtatggaactatccacaggttcctgacaacatcag cctcaactcctatgacgacacggacacttccgaggtagactcggctctcgggactcctctgcctgtctcggaaatatcct tctttgaccccctgacctctgacgactcaccacatttggacctaccgaaggaatcaaatctacgtactagtagtagctgg ctttttgatgctatgaatacatgtgcagagctggaacaagaatcagaattagaagctagatcagattttaaagagtcaga aaatggaatacagatttctgttgaagaaagtcaggaactagagtctggcatggaatctatatctgatcctacactcgctg aagataatgatgaaaacaacagcagggcatcctcaactatcgacctgagtgactttgatcctttaaggtcaaggtcaggg tcaaaggttgaaatcggtaaaggtgatattgacctttcaggaagtttcaaggctactgacctaaacaatcataatttttc tccaaagagagttgtgacttcttctccggcaaaaacaaaatctgcaagtcctttcaaaatgaagaggaaatcaaggagtg ataccaaagaaagtgtttccacgatggatttgggtggaaaggaagattatatttacttggctgccaatcagatttgcttg gcacaagattgtgaggctagtgctaagtttgaactggcattttcacactacaaagctggggtcggcattttgctacaggg tgtacagagtgacaagaataaatcacgtagggatgctgtacgtagaaagacagcacagtacctgctgaaggctgaagacc tgtacaacagacacctctctaaagacgtactggatgaaaaacgatgggctgatgacagcaagctatccccgacttatgag ttggatccctcaattagtatgttgaaaggttcctctgttgatctgaaactgtacaaggtactgggtactatagataaagt actgctagtgatggacaaaaacactgatgaaacatacgtgatgaagaccattcacaagtccgtagatatcaacagcaaaa ggatcaggacatttttcccagcccattgtccgtacatggtcagtctgtataaattctttgagacagattgtgccatacac ctgttacttcagcatgctaccggcggaaaactatggaactacataggtgcttatattcaaggccgtaaagatccagttga taatgacgcaaatcagttcggaaatgtttatgctggtacgaaactccacgagcacgataattctagtcaagattttaatt tagagaaaaaaatgaatggggatattgaacctaaatccaaattaatggattcgaatgatgtgcttgtgaaatactcagct tcatcaggtgatggagaaagcaagatttctattggtcgaaatattgaggaagattcaaccaatgaaaacacaggatatag aaaagaggaggagcaaaaacaggagcaggaaaagggatctatgaagataccagttgataggctagaaagtttctcttctg cagaggatggctttgagggtcaagaagttaggcctgcttcattggagcaaaaggattttgtctttcaagaactgctacag gatagcaagtctaatttagaacagtttagtatcattagttcagatagcacgagtagtgattgtagagctagagttgatag ttttgtctttgacaggagtgatatcattcaggaagagaatgaagtgcatggtgagtgtgtaggttttgttgatcaagaca atgtattcggtggtgaaaaaaaatcggatacgccggatcaggatgattcagagattattgtaaaaagtgctagagagtta ctcaagtctgtggagaggacgttatcccagactgatgccgaggttaacaaaatgttgaattcgaaagacaatacaggaaa tgtgcatcgtgatacattagatgttcaaagaacaaaaaatgtgacagaggtagtgacttcaggtcatagcagtgcaactg tgatagatgatagtgactcaaacgaggccagtatatatgatgtacatcattctagcagctccacagattctgattctata gacaagtgccataaatctgaaaataaaaatagtgctgaagtttactcggctttgaactgtgatacaaatacgagtgaatt ttacgcaagtaggagtgaaagaactagtacattaaaagcgaccaatcaagatggagattctggctcggaatcttcagaat caccttcaagaagtaaaacgtctcgatcatcaactctagtcaataattctcccgtcaaaaatgtttcggttggaaaatta agcttaacgagaatgaactctaaagaattaagtaggtcagcgtccatggaacacgaattgacttcacctccaaggtcgcg acagagaactgtgtcggatgtcttcaaagataccaatatggttgggagtctggagaacatcaacctccagatgaatgttc tgaaggaatttccctcatactcggatgatgaagaaagtaatgggggtagcaaatttggttga |
|
Protein
| Protein ID | pfu_aug1.0_7332.1_24198.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7332.1_24198.t1 MVSDIRESQEDSLDGVWNYPQVPDNISLNSYDDTDTSEVDSALGTPLPVSEISFFDPLTSDDSPHLDLPKESNLRTSSSW LFDAMNTCAELEQESELEARSDFKESENGIQISVEESQELESGMESISDPTLAEDNDENNSRASSTIDLSDFDPLRSRSG SKVEIGKGDIDLSGSFKATDLNNHNFSPKRVVTSSPAKTKSASPFKMKRKSRSDTKESVSTMDLGGKEDYIYLAANQICL AQDCEASAKFELAFSHYKAGVGILLQGVQSDKNKSRRDAVRRKTAQYLLKAEDLYNRHLSKDVLDEKRWADDSKLSPTYE LDPSISMLKGSSVDLKLYKVLGTIDKVLLVMDKNTDETYVMKTIHKSVDINSKRIRTFFPAHCPYMVSLYKFFETDCAIH LLLQHATGGKLWNYIGAYIQGRKDPVDNDANQFGNVYAGTKLHEHDNSSQDFNLEKKMNGDIEPKSKLMDSNDVLVKYSA SSGDGESKISIGRNIEEDSTNENTGYRKEEEQKQEQEKGSMKIPVDRLESFSSAEDGFEGQEVRPASLEQKDFVFQELLQ DSKSNLEQFSIISSDSTSSDCRARVDSFVFDRSDIIQEENEVHGECVGFVDQDNVFGGEKKSDTPDQDDSEIIVKSAREL LKSVERTLSQTDAEVNKMLNSKDNTGNVHRDTLDVQRTKNVTEVVTSGHSSATVIDDSDSNEASIYDVHHSSSSTDSDSI DKCHKSENKNSAEVYSALNCDTNTSEFYASRSERTSTLKATNQDGDSGSESSESPSRSKTSRSSTLVNNSPVKNVSVGKL SLTRMNSKELSRSASMEHELTSPPRSRQRTVSDVFKDTNMVGSLENINLQMNVLKEFPSYSDDEESNGGSKFG |
|