Gene
| Gene Model ID | pfu_aug1.0_7336.1_31372 |
|---|---|
| Locus | scaffold7336.1 : 4 ... 8997 : + |
| To GenomeBrowser | scaffold7336.1:4..8997 |
| Genes list of scaffold | scaffold7336.1 |
| Synonym | pfu_aug2.0_456.1_20800 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7336.1_31372.t1 | 1 | 1 | Branch | 248 | 453 | 8.0e-34 | 116.8 | 1.0e-37 | 1.5e-33 | 115.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7336.1_31372.t1 | gi|291224435|ref|XP_002732210.1| | PREDICTED: N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase, isoform A-like [Saccoglossus kowalevskii] | 1.4013e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7336.1_31372.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7336.1_31372.t1 atgaaaacagtatctgaaatacatgcactgtctgagcactcacaacagagcaccgaaattgagtatcgagtagcagaccg tgtggttattcggattacgtgcgcacaaccctcccacttttccgattacccagaggtatcgaagaacgctcgattgttgt gtaaattaacctcctcactaagttttcgatacattgagagccaacgttttagtgcagagagtctgacattccgaaatgga actttgaaattgcttggaaaatatctacatcattcgtccgtgcagaaagatgatgttccagatgtcttattggaaataga caatgtcaacagactgctgaaagaattgctgtccaagcaaagaagtagaaatatcatgagaaaaagtgtcgatgatactc tttcttctagatacagaaatgtttctacgcatgacttcaatgcaactgctttataccataggaaaaagacaagtgtttat aacagcaaaaattatgacggtgacctggtatatccggatatgaaatattttgttccaagcagaatcgtcaagggtgtcaa ctgtggcaggctgtttgcgggagacaagaatgaaatcggtttagcaaggacactgatgaaaaattattcagtatctaaat cacctgaagagtatatagaagacacaaaagattgtccttcttacatagaacggaatggttttataatgagttctttaaca gacgaagaacgtaattttccgttggcctacagcatcttattgtacaaggatgtcagccaatttgaaatccttttacgtgc aatttatagaccacagaatttctactgtgttcacgtcgattcgaaatctgagaaaaatatttatgacgctgtatccggta ttgctggatgttttgataacgtcataatgacgtcagaacgcttcaatgtctcctggggaaaatattctattcttgagccc gagtttagctgcatgaagcaacttttgaagtacaaaaaatggaaatatttcatcaatctgactggtcaagaatatcctct gagaacaaatgcagagttagtaaaaatcctgggagcttttaatcttgccaatgacgtagagggaactgttaaaagggcag atccaagtcgatgggtaaatgccggagttgtaccggatggaatagttccggtcaagggagctgtacatatcactgtcaac agaggatttgtggagtatgtgatcaaaagtccagtagccgaaaggttcaaaaagtgggtacaaaatgtagagttcccgga tgaagtcttcttctcaagtttaaatcataattctcaactccagatacccggatcctataaagaaattatgataaattccc acgattttatgagcgacgactag |
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Protein
| Protein ID | pfu_aug1.0_7336.1_31372.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7336.1_31372.t1 MKTVSEIHALSEHSQQSTEIEYRVADRVVIRITCAQPSHFSDYPEVSKNARLLCKLTSSLSFRYIESQRFSAESLTFRNG TLKLLGKYLHHSSVQKDDVPDVLLEIDNVNRLLKELLSKQRSRNIMRKSVDDTLSSRYRNVSTHDFNATALYHRKKTSVY NSKNYDGDLVYPDMKYFVPSRIVKGVNCGRLFAGDKNEIGLARTLMKNYSVSKSPEEYIEDTKDCPSYIERNGFIMSSLT DEERNFPLAYSILLYKDVSQFEILLRAIYRPQNFYCVHVDSKSEKNIYDAVSGIAGCFDNVIMTSERFNVSWGKYSILEP EFSCMKQLLKYKKWKYFINLTGQEYPLRTNAELVKILGAFNLANDVEGTVKRADPSRWVNAGVVPDGIVPVKGAVHITVN RGFVEYVIKSPVAERFKKWVQNVEFPDEVFFSSLNHNSQLQIPGSYKEIMINSHDFMSDD |
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