Gene
| Gene Model ID | pfu_aug1.0_7337.1_60228 |
|---|---|
| Locus | scaffold7337.1 : 3169 ... 23615 : - |
| To GenomeBrowser | scaffold7337.1:3169..23615 |
| Genes list of scaffold | scaffold7337.1 |
| Synonym | pfu_aug2.0_1430.1_01625 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7337.1_60228.t1 | 5 | 1 | LRR_6 | 19 | 43 | 2.3e-07 | 30.1 | 0.00017 | 0.63 | 10.2 |
| pfu_aug1.0_7337.1_60228.t1 | 5 | 2 | LRR_6 | 45 | 69 | 2.3e-07 | 30.1 | 3.4e-05 | 0.13 | 12.4 |
| pfu_aug1.0_7337.1_60228.t1 | 5 | 3 | LRR_6 | 83 | 95 | 2.3e-07 | 30.1 | 0.36 | 1300.0 | 0.0 |
| pfu_aug1.0_7337.1_60228.t1 | 5 | 4 | LRR_6 | 97 | 121 | 2.3e-07 | 30.1 | 0.00026 | 0.98 | 9.6 |
| pfu_aug1.0_7337.1_60228.t1 | 5 | 5 | LRR_6 | 130 | 146 | 2.3e-07 | 30.1 | 0.064 | 240.0 | 2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7337.1_60228.t1 | gi|307195170|gb|EFN77163.1| | F-box/LRR-repeat protein 20 [Harpegnathos saltator] | 1.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_7337.1_60228.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7337.1_60228.t1 atgaaaactgttgttacatgtttatcaagaacttgtgagagtttgggtaaatactgtcacaagctagccaagttggatat aagctcctgtccaagaatttcaaataattccttagcagcccttggtaatggctgtataaacctgaaaatagtagatatat catggtgcacacatttatccagtgatggactggaggcgttagctaaaggatgtacagaaatacacacgtttatcggtaaa ggtctcacacaggtgacggatgctggcattggtcacatagctaagtattgtaaacttctgaagaagattgatctcaacag ctgttcaaatataacagacgaagctgtgcatgagataggacagaattgtcatggactcctgttctgttgtatatctaact gtgcacgattaactgacgcatcacttgtctcattgggtcatggatgtcacgagttaagtaaaggcctattggagaaagga tacaactatataattattgtggatgatatgttggcctcacttgtatttttaaaagctatttgcattcagaaccctcagta ctttgaattttcattttga |
|
Protein
| Protein ID | pfu_aug1.0_7337.1_60228.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7337.1_60228.t1 MKTVVTCLSRTCESLGKYCHKLAKLDISSCPRISNNSLAALGNGCINLKIVDISWCTHLSSDGLEALAKGCTEIHTFIGK GLTQVTDAGIGHIAKYCKLLKKIDLNSCSNITDEAVHEIGQNCHGLLFCCISNCARLTDASLVSLGHGCHELSKGLLEKG YNYIIIVDDMLASLVFLKAICIQNPQYFEFSF |
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