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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7338.1_09537
Locus scaffold7338.1 : 28623 ... 30225 : -
To GenomeBrowser scaffold7338.1:28623..30225
Genes list of scaffold scaffold7338.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7338.1_09537.t1 gi|291240879|ref|XP_002740346.1| PREDICTED: betaine--homocysteine S-methyltransferase 1-like [Saccoglossus kowalevskii] 9.0e-23

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-Dshape 2
trochophore 1
>Adult tissues
Dshape 1
adductorMuscle 1

Transcript
Transcript IDpfu_aug1.0_7338.1_09537.t1
Definition-
>pfu_aug1.0_7338.1_09537.t1
atgataggagaaactttcaacgactttggagagggcatgttggctttagaggcgatacagaaatatggaaacggcgtacc
agctgtgattaccctaactccctatataccggatgtaactacagacgacataccgtttccggaagcatgtcggaggttgg
aggaagccggcgcagccgtagtagggttaaattgtgggcgtggcccagcgacgatgctacctctccttaaagaaatcaga
aaagtctgcaagagcacattttctttgatggaaacaagatgggtccaattgcagcacttccggtcccttttcgatgtcgt
gacgactgtaggacttttcaatctttaa

Protein
Protein IDpfu_aug1.0_7338.1_09537.t1
Definition-
>pfu_aug1.0_7338.1_09537.t1
MIGETFNDFGEGMLALEAIQKYGNGVPAVITLTPYIPDVTTDDIPFPEACRRLEEAGAAVVGLNCGRGPATMLPLLKEIR
KVCKSTFSLMETRWVQLQHFRSLFDVVTTVGLFNL

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