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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7340.1_24203
Locus scaffold7340.1 : 13568 ... 22315 : -
To GenomeBrowser scaffold7340.1:13568..22315
Genes list of scaffold scaffold7340.1
Synonym pfu_aug2.0_290.1_00554

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7340.1_24203.t1 1 1 Fork_head 13 108 1.4013e-43 146.8 0.0 2.29813e-43 146.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7340.1_24203.t1 gi|105554437|ref|NP_036314.2| forkhead box protein B1 [Homo sapiens] 0.0

Transcript
Transcript IDpfu_aug1.0_7340.1_24203.t1
Definition-
>pfu_aug1.0_7340.1_24203.t1
atgccacgaccaggacgtaatacttacaatgaacagaagccaccttattcatacattgctctgacggctatggccatcca
ggcttcagaagaaaaaatgctgccattgaatgaaatctacaaatttatcatggacaggtttcctttttatagacaaaata
ctcaaagatggcagaactcacttcgtcataatctgtcattcaatgattgcttcataaagattccgaggaggccagatagg
ccgggaaagggaagctactgggctttgcatccaatgtgtggcgacatgtttgaaaatggaagttttcttcgaagacgtaa
aagatttaaaattcagtttcgcaatcatcttgctgctatgagcaatccttttaaacatgaaatggagacgtcatttctac
aaggacaggctagaattagccttcaacagcttggtactgcttctaggtttgcttcgtacagtcagctgagtggtaacgtg
acggtgccaaggagaaaacaaccatttacaatagagaacattatagcaccagaacagaaatctagctctgcgattcagca
gccggttgttccaacgccgttgccagctttcgcaagtcaattttcaaatggactgaattgttctggtctcgtgacaccat
actcttcaacagacttgttgactaacctagccagttcttattgtatacctacagattaccaaagtttactgaaggcacat
cctcatacggacccctatgtgagaccagccttcccgttaccaatcaaaccttcgccgatctcggccttgtctctggcctc
tgtacacgggaacatgccgacaaccattgtgtctaacattgactcctcaacattaggtaatccatctgtgctttctctgt
ccacggatctgacaataaataggtctaagcaattgtcaagtgaagtaagtaacaagtcgcttgctttaagtgtagccgct
cctgaaaaatcagatattccatga

Protein
Protein IDpfu_aug1.0_7340.1_24203.t1
Definition-
>pfu_aug1.0_7340.1_24203.t1
MPRPGRNTYNEQKPPYSYIALTAMAIQASEEKMLPLNEIYKFIMDRFPFYRQNTQRWQNSLRHNLSFNDCFIKIPRRPDR
PGKGSYWALHPMCGDMFENGSFLRRRKRFKIQFRNHLAAMSNPFKHEMETSFLQGQARISLQQLGTASRFASYSQLSGNV
TVPRRKQPFTIENIIAPEQKSSSAIQQPVVPTPLPAFASQFSNGLNCSGLVTPYSSTDLLTNLASSYCIPTDYQSLLKAH
PHTDPYVRPAFPLPIKPSPISALSLASVHGNMPTTIVSNIDSSTLGNPSVLSLSTDLTINRSKQLSSEVSNKSLALSVAA
PEKSDIP

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