Gene
| Gene Model ID | pfu_aug1.0_7348.1_38515 |
|---|---|
| Locus | scaffold7348.1 : 13006 ... 41072 : + |
| To GenomeBrowser | scaffold7348.1:13006..41072 |
| Genes list of scaffold | scaffold7348.1 |
| Synonym | pfu_aug2.0_405.1_17398 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7348.1_38515.t1 | 3 | 1 | IF-2 | 357 | 371 | 1.5e-07 | 31.2 | 0.58 | 2900.0 | -1.9 |
| pfu_aug1.0_7348.1_38515.t1 | 3 | 2 | IF-2 | 472 | 490 | 1.5e-07 | 31.2 | 0.61 | 3000.0 | -1.9 |
| pfu_aug1.0_7348.1_38515.t1 | 3 | 3 | IF-2 | 578 | 616 | 1.5e-07 | 31.2 | 3.0e-11 | 1.5e-07 | 31.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7348.1_38515.t1 | gi|327284904|ref|XP_003227175.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 2 |
| maleGonad | 2 |
| mantle | 2 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7348.1_38515.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7348.1_38515.t1 atgtttatactttttcatattatcttttacagtgaggataacgaggtagatcttgatcctttagcaaatcagacaccaga tgatgacacatcatccaaagttgctacaaaatctgcaggaaaaaagaagaaaggaaagaaaaaggatgatgattgggagg acgacgttgctgaggaaattaaagctttgtcattacagtctaaaggagatttgaatgaaagtgaagaagaggaggaaata gttgttcctgtcaaaaagaaggagaagaagaagaagaacaagaaggttgaatctgacgaggaagaagaagaagaaatgaa acccaaaggtactttccagatgttgatgatagaggatgatgatatggtacagtctgagagtgacaacgaaatggaagaaa aagaagacacacccgttattgaagcccctaaggaaaacactgtaaaaccacaaaagaaaaaggacaagaaaaaggataaa aaggacactaaacaagaggaagatattgatgcattgttagcagaattagacagaccctcagaaaaatcaaaaaagaagaa aaagaagaaaggggaggaagaagaaactacagaggcagcccctgccactggaactgaagaacaacaagaagttgatatag aagctaaaatggctgaggctaaagtagtgtctattgatgacttcgatgaggaagaggatgacaaaaagaagaaaaagaga gaaaagaagaagaaggcaaagaaagcagatgctgaacagaaggatggagaagaagaaggagaaaaacaggaaggagagaa tgaaggagagggggaggagggttcagtaaaaacagcagctcagaaaaggaaagaaaagaaagaaagagaaaaactaaaaa agcaacaggagaaaaagaagagtaagagtaaaggagagggggctacagggactgaggatcaagctgaaggagataaggaa ggggagggcaaagatgatgctgaagaggatgaaggtgaagagaaggaaggaaagaagaagaaaaagaaaggagagaaaga agaaaagaaaaagaaatcaaaagcaccagtggcagctatcaaagcccagcttcagaagataaaggaagaagaggagaggt taaagagggaagaggaagaaagaatacgcaaggaagaagaagaagaaagactgagagaagaacaaaaaagattagaggaa gaaaggaagttaaagaagaagcagaaagagaaggagaagaagcagagactgaaggaggaaggtaaactcctgacagcaaa agagaaacaagacagaaggagggcattacagttattagaacagatgaaagcacaaggtattgatgtaccggataaaggag aatcagcagaaaaagacgaggctccagttaagaaaagacctgtatatacaaataagaagaaaaaacctcaaaaacaagat aatgtaaaaataatattaaatgctataattgatggatttagtcagtgggaacaccacaaagaagtgtacgctgctcaggg agtcaaaatcattgcaaaggactttgaaaaagctctagccggacttcctatgtatgtggccaagcgagatgacgaagtgg agtattataagtttatgaatggctgtatggtttgtgtgacctttacgtcgtcaggatcctaccacagctgggggaataat aaagcaatgaaacccggctactttgatattctgtcaggttacagtgtcggatatgctgtgattctggcatttgatgtcaa agtagaaagagaggctcaagaaatggcggacagcgtcggcgtcaaaatcttcacagcagacattatttatcacttatttg acaaatttatagcatatcgtgatgaattcaaaaagaagaaacaagaagaattcaaacatatagctgtgtttccatgtaaa ctccgtgttctgcctcagtttatatttaattcccgtgaccccattgtggtcggtgtatgtgtagaagcagggttcgtcaa ggaagggacgccactctgtgtaccaagtaaagagtataacgatgacgtcaaacgcggcccccggaagttcacgctgatta tcgcctag |
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Protein
| Protein ID | pfu_aug1.0_7348.1_38515.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7348.1_38515.t1 MFILFHIIFYSEDNEVDLDPLANQTPDDDTSSKVATKSAGKKKKGKKKDDDWEDDVAEEIKALSLQSKGDLNESEEEEEI VVPVKKKEKKKKNKKVESDEEEEEEMKPKGTFQMLMIEDDDMVQSESDNEMEEKEDTPVIEAPKENTVKPQKKKDKKKDK KDTKQEEDIDALLAELDRPSEKSKKKKKKKGEEEETTEAAPATGTEEQQEVDIEAKMAEAKVVSIDDFDEEEDDKKKKKR EKKKKAKKADAEQKDGEEEGEKQEGENEGEGEEGSVKTAAQKRKEKKEREKLKKQQEKKKSKSKGEGATGTEDQAEGDKE GEGKDDAEEDEGEEKEGKKKKKKGEKEEKKKKSKAPVAAIKAQLQKIKEEEERLKREEEERIRKEEEEERLREEQKRLEE ERKLKKKQKEKEKKQRLKEEGKLLTAKEKQDRRRALQLLEQMKAQGIDVPDKGESAEKDEAPVKKRPVYTNKKKKPQKQD NVKIILNAIIDGFSQWEHHKEVYAAQGVKIIAKDFEKALAGLPMYVAKRDDEVEYYKFMNGCMVCVTFTSSGSYHSWGNN KAMKPGYFDILSGYSVGYAVILAFDVKVEREAQEMADSVGVKIFTADIIYHLFDKFIAYRDEFKKKKQEEFKHIAVFPCK LRVLPQFIFNSRDPIVVGVCVEAGFVKEGTPLCVPSKEYNDDVKRGPRKFTLIIA |
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