Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7354.1_09542
Locus scaffold7354.1 : 1 ... 6045 : -
To GenomeBrowser scaffold7354.1:1..6045
Genes list of scaffold scaffold7354.1
Synonym pfu_aug2.0_58.1_26766

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7354.1_09542.t1 1 1 EF-hand_7 16 72 2.8e-11 43.3 2.3e-14 3.7e-11 42.9
pfu_aug1.0_7354.1_09542.t1 1 1 EF-hand_6 16 45 1.1e-08 34.2 2.6e-11 4.3e-08 32.3
pfu_aug1.0_7354.1_09542.t1 1 1 EF-hand_1 17 44 3.3e-09 35.3 3.6e-12 6.0e-09 34.5

Transcript
Transcript IDpfu_aug1.0_7354.1_09542.t1
Definition-
>pfu_aug1.0_7354.1_09542.t1
atggcaatcgcagcgaagacaaaaaaggattccgacttcgatgtcagaataagagaggcattcaaggtttttgataaaga
caacacggggagcattgatgttaacgacttccggaatctgatgacgaatctgggtgataaattcacggacgaagacgtag
atgagataattcaggaagtgggattaacgccagatcggaagataacatgtgaagattgctacgactctactacggattgc
tacgactcttctacgggttga

Protein
Protein IDpfu_aug1.0_7354.1_09542.t1
Definition-
>pfu_aug1.0_7354.1_09542.t1
MAIAAKTKKDSDFDVRIREAFKVFDKDNTGSIDVNDFRNLMTNLGDKFTDEDVDEIIQEVGLTPDRKITCEDCYDSTTDC
YDSSTG

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