Gene
Gene Model ID | pfu_aug1.0_7360.1_67676 |
---|---|
Locus | scaffold7360.1 : 786 ... 23821 : + |
To GenomeBrowser | scaffold7360.1:786..23821 |
Genes list of scaffold | scaffold7360.1 |
Synonym | pfu_aug2.0_189.1_30386 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_7360.1_67676.t1 | 1 | 1 | Neur_chan_LBD | 68 | 164 | 2.2e-23 | 82.5 | 5.8e-27 | 4.3e-23 | 81.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_7360.1_67676.t1 | gi|77020758|gb|ABA60381.1| | nicotinic acetylcholine receptor subunit type B [Lymnaea stagnalis] | 2.0e-27 |
Transcript
Transcript ID | pfu_aug1.0_7360.1_67676.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7360.1_67676.t1 atgaacgcaaaaacgaggcgcccaaacggcgacatgcgtcgaaagaagtatatccaaatacgaaacggatctgtcgctct cggttgcctccccgacccccagtctacgataacagatcccgtgcagatgatcctaaaacttcggatcaccgatggacaac acgtcatctatgcatccgaagataatgtccattcgaagtcagaaaaacaattggtgaagacccttatagaggactacaag aggaggggtatttatggacgtcctgtacgtaacaacagcgataaggttcttctcaaatatggactcagtctggtgcaaat cttggatctggacgagcagaaccaagtacttagtactaatgtctggactacttactggtggaaagactatcacgttcatt ggaaccccgaggaatacgggaatgtatctaaagttcgtatccccagtaacactctgtggaagccagatgtcaagttatac aacttgggacttttcaagaaagattatgctatattgagtcaattagatataatgattggaaatttcaacagtcatatatt ttctattgtaggggtatactattgtctgaacatgattttgatcactgtgtcaacatttctatgtgtcttggttgtcaatc tttcgtaccatggctatgtgactcgtgtcccatcaatagtaagaaagattatgttaggctttctggctcatgttctttgt gtcacaaaagcaaaaaggaaaataagaaaacccgacaacctgctaagaaagatagaatgtaggcaagaaaatggtgatat agctcatcaacagcaagatacatcgagtcctctactctccgaacattacactcaggaggagatactttcatcgggtcggc tgaagagtctagacgacttgacaaatgagtcatatcgtatcagtgcattttcttccgaaagatgcatcgaaaagtctttg caacgatacgtcctacaacaatcacagatcctcggaaatttccgtagcgtgaatcggaaataa |
Protein
Protein ID | pfu_aug1.0_7360.1_67676.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7360.1_67676.t1 MNAKTRRPNGDMRRKKYIQIRNGSVALGCLPDPQSTITDPVQMILKLRITDGQHVIYASEDNVHSKSEKQLVKTLIEDYK RRGIYGRPVRNNSDKVLLKYGLSLVQILDLDEQNQVLSTNVWTTYWWKDYHVHWNPEEYGNVSKVRIPSNTLWKPDVKLY NLGLFKKDYAILSQLDIMIGNFNSHIFSIVGVYYCLNMILITVSTFLCVLVVNLSYHGYVTRVPSIVRKIMLGFLAHVLC VTKAKRKIRKPDNLLRKIECRQENGDIAHQQQDTSSPLLSEHYTQEEILSSGRLKSLDDLTNESYRISAFSSERCIEKSL QRYVLQQSQILGNFRSVNRK |