Gene
| Gene Model ID | pfu_aug1.0_7392.1_60241 |
|---|---|
| Locus | scaffold7392.1 : 14049 ... 26106 : - |
| To GenomeBrowser | scaffold7392.1:14049..26106 |
| Genes list of scaffold | scaffold7392.1 |
| Synonym | pfu_aug2.0_329.1_30625 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7392.1_60241.t1 | 1 | 1 | CUB | 260 | 373 | 1.6e-24 | 86.0 | 1.9e-28 | 2.8e-24 | 85.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7392.1_60241.t1 | gi|301766510|ref|XP_002918674.1| | PREDICTED: cubilin [Ailuropoda melanoleuca] | 1.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7392.1_60241.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7392.1_60241.t1 atgccactgaaagtactcctacaaaaagcccagtacaaacaaatgtcgtggtatctagtacattgggagaactgcatcaa ggaggcgtctaaagcattccgggaattttacagacgaccttacttcttaccacagatagtagaaatatcagacacaaact gggtcttcatatcaaagggagataaacaacaatatgaagagctgcctattccaaattctctcgttatactaatgcaaata aaaggacaattaagtgtcagactcacaccaagggatccatgtagaaaagtgtgtcatgtactggatatcacagttaacca aggggaagtctgtatactaaagaaaaagtccgtgctctgctggcaggaccgagctcgtttacaatttcccgaaggagagg gtgagttggaatctctacgcagtgatctcagtgaaataaaggaggaactcctaaaattagaagaaaagaaatctaaagct ttaaaacccgacgatacaattacagaagttaagttgttcgttgcatgtcacgtgcgatattctttacagacaaaagaaga ggaagtaaaacagagaaacaagaagaagaaaagtaggtttaatgttcccgctgagcaggaggagagctcgtccggagctt acgagtccgacatgatactgagcccccaagagcttcaggagctacagagcacacgattcaggaggaaggcagtacaaaat gagatgaagctttggccgggagggataatccattatgaattcgaacaaggactagattgtgggggagtattaaaagataa gacaggagtgatcacttctccaaactatccaggggaatatgaagcggaatcaaaatgtcattggttaatacagggaccac atgacagccacattaccttacagtttgatgactttgaagtggaacaggacgtagactgtttgtgggactacgtggagata accatgcaaggattacacatgggagggccgagatattgtggtgaggcttccggatttgaacatatgccaaaaggcgtctt ccagtatcctggcaacgccttaatgatcacactgaaatcagacgacggctaccagttcagaggattcaaagcacgctaca caattcatacgtga |
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Protein
| Protein ID | pfu_aug1.0_7392.1_60241.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7392.1_60241.t1 MPLKVLLQKAQYKQMSWYLVHWENCIKEASKAFREFYRRPYFLPQIVEISDTNWVFISKGDKQQYEELPIPNSLVILMQI KGQLSVRLTPRDPCRKVCHVLDITVNQGEVCILKKKSVLCWQDRARLQFPEGEGELESLRSDLSEIKEELLKLEEKKSKA LKPDDTITEVKLFVACHVRYSLQTKEEEVKQRNKKKKSRFNVPAEQEESSSGAYESDMILSPQELQELQSTRFRRKAVQN EMKLWPGGIIHYEFEQGLDCGGVLKDKTGVITSPNYPGEYEAESKCHWLIQGPHDSHITLQFDDFEVEQDVDCLWDYVEI TMQGLHMGGPRYCGEASGFEHMPKGVFQYPGNALMITLKSDDGYQFRGFKARYTIHT |
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