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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_73945.1_63791
Locus scaffold73945.1 : 1 ... 945 : -
To GenomeBrowser scaffold73945.1:1..945
Genes list of scaffold scaffold73945.1
Synonym pfu_aug2.0_48.1_26734

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_73945.1_63791.t1 1 1 7tm_1 82 177 7.7e-09 35.0 2.2e-12 8.2e-09 34.9

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
mantle 1

Transcript
Transcript IDpfu_aug1.0_73945.1_63791.t1
Definition-
>pfu_aug1.0_73945.1_63791.t1
atgaagaagaacataattcagagagattccttagtgtcacagacaattgaagaggacaacgttttcactgtggaaggaaa
gaacacagtaatagaatcagtacagtcagatacctcgtgtttcaaatcattattgacacttctacctttcaaaagttcca
cagtacctagtcaagtcaaacttaccaagtactctccaaatggaagcatcaaagaggagactcgacaaaggagcaaatac
gaaaagtatccaagaagtatttcaagttcaagcagcaaaggatctagaaatccaagattatacaagagaagtaaatcaat
aaaagagaaagccaacataaaacgtgcaaatgccgtatttgcgtctataactttcgtctttgtcttgagttatcttccgt
ttttgttactagagatactgaaacaagttggcgtgatttcagatgaccttaacaataggacagaacagtctgtctttgaa
ctcttcacaaaaacaatgtacctcaataatgtcatcaatccttttatctatggcatccttaattcttctttcagagatga
aattaaatgcctcttcacaggaaagatcccaaaacgaagaaattctggtagttctaggcgaaaaatctaa

Protein
Protein IDpfu_aug1.0_73945.1_63791.t1
Definition-
>pfu_aug1.0_73945.1_63791.t1
MKKNIIQRDSLVSQTIEEDNVFTVEGKNTVIESVQSDTSCFKSLLTLLPFKSSTVPSQVKLTKYSPNGSIKEETRQRSKY
EKYPRSISSSSSKGSRNPRLYKRSKSIKEKANIKRANAVFASITFVFVLSYLPFLLLEILKQVGVISDDLNNRTEQSVFE
LFTKTMYLNNVINPFIYGILNSSFRDEIKCLFTGKIPKRRNSGSSRRKI

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