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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7400.1_52946
Locus scaffold7400.1 : 31256 ... 45318 : +
To GenomeBrowser scaffold7400.1:31256..45318
Genes list of scaffold scaffold7400.1
Synonym pfu_aug2.0_569.1_30927

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7400.1_52946.t1 1 1 Hormone_recep 140 212 2.0e-06 27.0 2.8e-10 4.2e-06 26.0

Transcript
Transcript IDpfu_aug1.0_7400.1_52946.t1
Definition-
>pfu_aug1.0_7400.1_52946.t1
atgacaagaaattggccttttacatatgaggagcaaaaacaagttcgaaagcagaaaataatcataaacaaactcaggaa
gcagggtcaacttccgccggaagacacgtacgccgcgtcagaacgtgatctcaatgataccgtacaggacaatctgaaaa
gccagtctttccatgaactacgaacaacattcccaaatttgtcggatactgacatccgggcacttatgaatttacagtca
ggaaaagacggcaagacttcttccgaaccaaacaaatatcctagttggatcgattctcaggaaatagtggcggatctaat
agcagagctcccagaaatagatcagtgtatattgaacgaattgcgcgttgcgcatgagcaaagctcgtttctcggaagca
ctcagacgtctttgaaacaactgccgacaaatccgacggaatttctaaacgtggctgagggttttgttagacggataata
aaacttgctaagaatatagagttttttaaaatggtaattaaagaggaccaaattgcgcttctcaagggagcagtggtaga
gatcctgatgctaaggtcggcggtcaactatgacattcatacggagacttggagtttaaacacaatgaaatgtctaacga
aaggggcggcaccactgctgggtactgctccttccacatcagacccaaggagttccctcccttcctccacaagtacaccg
gctgaaagtccgacatccaccagtgtcgctaatcctctcatttcatcaaatatttcagccgagcatttgaagagtatggc
aaaagcatcagacgatgtaaattga

Protein
Protein IDpfu_aug1.0_7400.1_52946.t1
Definition-
>pfu_aug1.0_7400.1_52946.t1
MTRNWPFTYEEQKQVRKQKIIINKLRKQGQLPPEDTYAASERDLNDTVQDNLKSQSFHELRTTFPNLSDTDIRALMNLQS
GKDGKTSSEPNKYPSWIDSQEIVADLIAELPEIDQCILNELRVAHEQSSFLGSTQTSLKQLPTNPTEFLNVAEGFVRRII
KLAKNIEFFKMVIKEDQIALLKGAVVEILMLRSAVNYDIHTETWSLNTMKCLTKGAAPLLGTAPSTSDPRSSLPSSTSTP
AESPTSTSVANPLISSNISAEHLKSMAKASDDVN

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