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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_742.1_58233
Locus scaffold742.1 : 40656 ... 52334 : +
To GenomeBrowser scaffold742.1:40656..52334
Genes list of scaffold scaffold742.1
Synonym pfu_aug2.0_1506.1_21656

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_742.1_58233.t1 1 1 GAF 153 237 1.3e-08 35.0 5.1e-12 2.5e-08 34.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_742.1_58233.t1 gi|242020583|ref|XP_002430732.1| dual 3',5'-cyclic-AMP and -GMP phosphodiesterase, putative [Pediculus humanus corporis] 0.0

Transcript
Transcript IDpfu_aug1.0_742.1_58233.t1
Definition-
>pfu_aug1.0_742.1_58233.t1
atgacggagggggctgacacggagaaaagccccagtctgtccgaggagtacgaacggatggagaaatggctggacgaaca
cccggaattcacgcatgattactttgcgcggaaagcgaaacgtagcatggtggatggttggttgatagcccaagcccttg
cccacagcccgggcctaaatctgcagtcggataataattccagtggttcaaactcacgaaataattccggagctaacact
cctgtacgtaagatatcggcacaggagttcgatagaggagatcccctgaatcctattctatctaccgttgacggcacgcc
gaccttcataggaccatcgacgtcatctacgtcattaaacagtgctaaatacagacgtcccaggacagaactacgtgcat
tggatgaaaaacaacttatgtacgaactggtcattgatatatgcaatgatttggatgtaactagtttgtgtcataaaatc
ttgcagaatgtttgcatcttattaaacgctgacaggtgctctcttttcctggttcacaaacgtcaatctgaggatcgtta
cctagaagccaaactctttgatgttagcgctgacaccaccctggaggaggtgtccgagaacagggaggcgatccgcatcc
cctggggtacggggatcataggatatgtggctgaaacaggcgaggcactcaacatccctgatgcatataaggtcagtatc
tgtaacagagctctatga

Protein
Protein IDpfu_aug1.0_742.1_58233.t1
Definition-
>pfu_aug1.0_742.1_58233.t1
MTEGADTEKSPSLSEEYERMEKWLDEHPEFTHDYFARKAKRSMVDGWLIAQALAHSPGLNLQSDNNSSGSNSRNNSGANT
PVRKISAQEFDRGDPLNPILSTVDGTPTFIGPSTSSTSLNSAKYRRPRTELRALDEKQLMYELVIDICNDLDVTSLCHKI
LQNVCILLNADRCSLFLVHKRQSEDRYLEAKLFDVSADTTLEEVSENREAIRIPWGTGIIGYVAETGEALNIPDAYKVSI
CNRAL

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