Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_742.1_58234
Locus scaffold742.1 : 53746 ... 69530 : +
To GenomeBrowser scaffold742.1:53746..69530
Genes list of scaffold scaffold742.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_742.1_58234.t1 1 1 GAF 5 72 1.1e-08 35.3 1.9e-12 1.4e-08 35.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_742.1_58234.t1 gi|115712773|ref|XP_795052.2| 2.0e-25

Transcript
Transcript IDpfu_aug1.0_742.1_58234.t1
Definition-
>pfu_aug1.0_742.1_58234.t1
atgaaaggtcgtaatgatccccgttttaacgacgaaattgatctccaaatgaattaccgaacgcacagcatccttagcat
gccaatcaaggattgtgagggtcaagtcataggcgtggctcaagctataaatagaatcggtaccaaagatgaaccattca
ctagccatgatgaaaaggtgttcgcctcttacctagctttctgtggaataggcctgaaaaatgctcaactctatgagaaa
tccttattggaaaatagaagaaaccagtgtccgtag

Protein
Protein IDpfu_aug1.0_742.1_58234.t1
Definition-
>pfu_aug1.0_742.1_58234.t1
MKGRNDPRFNDEIDLQMNYRTHSILSMPIKDCEGQVIGVAQAINRIGTKDEPFTSHDEKVFASYLAFCGIGLKNAQLYEK
SLLENRRNQCP

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