Gene
| Gene Model ID | pfu_aug1.0_742.1_58236 |
|---|---|
| Locus | scaffold742.1 : 86957 ... 99185 : - |
| To GenomeBrowser | scaffold742.1:86957..99185 |
| Genes list of scaffold | scaffold742.1 |
| Synonym | pfu_aug2.0_297.1_23835 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_742.1_58236.t1 | 1 | 1 | NTF2 | 2 | 76 | 1.5e-22 | 80.1 | 1.2e-25 | 3.0e-22 | 79.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_742.1_58236.t1 | gi|260802590|ref|XP_002596175.1| | hypothetical protein BRAFLDRAFT_203026 [Branchiostoma floridae] | 8.99634e-43 |
Transcript
| Transcript ID | pfu_aug1.0_742.1_58236.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_742.1_58236.t1 atgggacaagctgacatccataagaaaatcatgtccctgaacttccgtgactgtcatgccaagatacgccaggtggatag tcaagctacagtagggaatgctgtagttgtacaggtaacaggagagttgtctaacaacggtcaacccatgagaaggttta tgcagacctttgtactggctccccagtcaccaaagaagtactacgtccacaacgatatcttccgctatcaggacgaggtt ttccatgacgatagtgatatggaaaatcaagatgaagagggtgtctatttttccagcaatggtactgtccatatggagga gcgtgtggattcaccatcccagcggtcactagaggaggagaaggaggaggaattagaacctgaggagccattagaggaga aggtagtgatggaggagcctgtaccagtagatacagagccagaggtggtggaggaggaaccacaaaatgtctctgaacaa aaaacattttcctgggcagcaatggctagtaagaatgctaacacaggtgcaccctccatgcctccccagcagccaagtcc tatgatgtcacaaggctttgagtatggtaatgtagtggaactgagaataaatacaaaaggagctggtggaaaattaccta attttggttttgtggtttttgatagtgacatgcctgtacaggagatcttgaggcaaaaggtaataaatcaacctaagaat tga |
|
Protein
| Protein ID | pfu_aug1.0_742.1_58236.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_742.1_58236.t1 MGQADIHKKIMSLNFRDCHAKIRQVDSQATVGNAVVVQVTGELSNNGQPMRRFMQTFVLAPQSPKKYYVHNDIFRYQDEV FHDDSDMENQDEEGVYFSSNGTVHMEERVDSPSQRSLEEEKEEELEPEEPLEEKVVMEEPVPVDTEPEVVEEEPQNVSEQ KTFSWAAMASKNANTGAPSMPPQQPSPMMSQGFEYGNVVELRINTKGAGGKLPNFGFVVFDSDMPVQEILRQKVINQPKN |
|