Gene
| Gene Model ID | pfu_aug1.0_74379.1_49164 |
|---|---|
| Locus | scaffold74379.1 : 1 ... 3616 : - |
| To GenomeBrowser | scaffold74379.1:1..3616 |
| Genes list of scaffold | scaffold74379.1 |
| Synonym | NA |
Manual annotation
| Study field | structural proteins |
|---|---|
| Gene name | myosin heavy chain |
| Description | Myosin heavy chain partial sequence. BLAST top hit to AF134172 (Pecten maximus). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_74379.1_49164.t1 | 1 | 1 | Myosin_tail_1 | 1 | 174 | 0.0 | 195.0 | 0.0 | 0.0 | 194.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_74379.1_49164.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_74379.1_49164.t1 aagaggcaggtggggccaccaatgttcaagttgaaatcaacaagaagcgtgaagctgagctcatgaaactcagaagggaa cttgaggaagcagcaatcaacagtgaccagcaggtagcagctctacgcaaaaagcagcaggagatggccaatgaaatgtc cgaccaaattgactctttgaacaaggctaagagcaagatggaaggagaaaagaaggcattgaagagtgagcttgatgata ttcaggcacagcttcaacacgttgttaagaacaagcagtcggctgagaagatggccaagcacctcgaatctcaattgtct gaagccaatggcaggattgacgaggccaacaggatcatagctgatctgaactcatccaagaacaagttgtcctcagagaa ctcggatctccagaggcagcttgaggaagctgaagcacgcatttctgttcttacaaaggagaaacagagcgtttctgctc agctggatgaagctcgctcgtctgctgaggaagaagccagatcccctacctgcaacgccgaaggggatttttag |
|
Protein
| Protein ID | pfu_aug1.0_74379.1_49164.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_74379.1_49164.t1 EAGGATNVQVEINKKREAELMKLRRELEEAAINSDQQVAALRKKQQEMANEMSDQIDSLNKAKSKMEGEKKALKSELDDI QAQLQHVVKNKQSAEKMAKHLESQLSEANGRIDEANRIIADLNSSKNKLSSENSDLQRQLEEAEARISVLTKEKQSVSAQ LDEARSSAEEEARSPTCNAEGDF |
|