Gene
Gene Model ID | pfu_aug1.0_74379.1_49164 |
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Locus | scaffold74379.1 : 1 ... 3616 : - |
To GenomeBrowser | scaffold74379.1:1..3616 |
Genes list of scaffold | scaffold74379.1 |
Synonym | NA |
Manual annotation
Study field | structural proteins |
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Gene name | myosin heavy chain |
Description | Myosin heavy chain partial sequence. BLAST top hit to AF134172 (Pecten maximus). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_74379.1_49164.t1 | 1 | 1 | Myosin_tail_1 | 1 | 174 | 0.0 | 195.0 | 0.0 | 0.0 | 194.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_74379.1_49164.t1 |
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Definition | - |
>pfu_aug1.0_74379.1_49164.t1 aagaggcaggtggggccaccaatgttcaagttgaaatcaacaagaagcgtgaagctgagctcatgaaactcagaagggaa cttgaggaagcagcaatcaacagtgaccagcaggtagcagctctacgcaaaaagcagcaggagatggccaatgaaatgtc cgaccaaattgactctttgaacaaggctaagagcaagatggaaggagaaaagaaggcattgaagagtgagcttgatgata ttcaggcacagcttcaacacgttgttaagaacaagcagtcggctgagaagatggccaagcacctcgaatctcaattgtct gaagccaatggcaggattgacgaggccaacaggatcatagctgatctgaactcatccaagaacaagttgtcctcagagaa ctcggatctccagaggcagcttgaggaagctgaagcacgcatttctgttcttacaaaggagaaacagagcgtttctgctc agctggatgaagctcgctcgtctgctgaggaagaagccagatcccctacctgcaacgccgaaggggatttttag |
Protein
Protein ID | pfu_aug1.0_74379.1_49164.t1 |
---|---|
Definition | - |
>pfu_aug1.0_74379.1_49164.t1 EAGGATNVQVEINKKREAELMKLRRELEEAAINSDQQVAALRKKQQEMANEMSDQIDSLNKAKSKMEGEKKALKSELDDI QAQLQHVVKNKQSAEKMAKHLESQLSEANGRIDEANRIIADLNSSKNKLSSENSDLQRQLEEAEARISVLTKEKQSVSAQ LDEARSSAEEEARSPTCNAEGDF |