Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7438.1_02443
Locus scaffold7438.1 : 4906 ... 6765 : +
To GenomeBrowser scaffold7438.1:4906..6765
Genes list of scaffold scaffold7438.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7438.1_02443.t1 1 1 Tmemb_cc2 5 82 1.6e-24 86.2 8.6e-28 1.8e-24 86.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7438.1_02443.t1 gi|270004223|gb|EFA00671.1| hypothetical protein TcasGA2_TC003548 [Tribolium castaneum] 1.0e-20

Transcript
Transcript IDpfu_aug1.0_7438.1_02443.t1
Definition-
>pfu_aug1.0_7438.1_02443.t1
atgacaataaagaagtatgagaacgtgaatgaatatttacgtttagctgggagtgcagataagcaacagcttacaaggat
taaagctgcatttgaaaagaaaaaccagaaatccacgcaaagtttgagtagtcttcagaagaagctggagggctaccata
aacgacaggcagagctagaaaagtatggtgtatctagtcacaagccagcaaaagaagtgctcaaagatgtaggccatgga
ttgaagtaa

Protein
Protein IDpfu_aug1.0_7438.1_02443.t1
Definition-
>pfu_aug1.0_7438.1_02443.t1
MTIKKYENVNEYLRLAGSADKQQLTRIKAAFEKKNQKSTQSLSSLQKKLEGYHKRQAELEKYGVSSHKPAKEVLKDVGHG
LK

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