Gene
| Gene Model ID | pfu_aug1.0_7438.1_02445 |
|---|---|
| Locus | scaffold7438.1 : 17460 ... 20730 : - |
| To GenomeBrowser | scaffold7438.1:17460..20730 |
| Genes list of scaffold | scaffold7438.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7438.1_02445.t1 | 1 | 1 | Otopetrin | 20 | 296 | 0.0 | 267.2 | 0.0 | 0.0 | 266.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7438.1_02445.t1 | gi|241616932|ref|XP_002408082.1| | conserved hypothetical protein [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7438.1_02445.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7438.1_02445.t1 taatttatccacgacggaatggatatccatggaatggtaccatgtacatcccagaaatatcctgttattggacagaactc ttcggaaaagtggtggatgaagcggcgccgtatctttacccgtgcaagattgagtatagcctaatatgtgcaggtatact tatcgttatgtggagaaatgtaggcttcgacaagtcatcagcgctaaatgacacgacgagcatgtcgtctgccgaaccac aagacaaagtgcacaaaagacacaaaagtgtcagctgcaagagctcaagtcgcgggctttttgcagggatcttggtgacc gtaggtgcaataataactatgattgctttttatgttttgagaagcaaaactaagatggacagtaccgctatagttttggt gcacctgtctgaagcaggcatgtacattcttactacatttgccatcgtcctggcagcagatagaatgaaaaatctaaagt tccatgtcaatatcaaaggtggtatagaggaacctttgacactcatttcattttcaggactgtttatgttcgcggttttc agtgtggtcgcagcaacttttgaaattcacactccgagtggtgttctcaacattttgactaatctattcatgatcgtgca atctacaatccaaactctcttcatcatcgccggcagcaaggtatccgctgttacggttgaacaagagcgcaaaaagcgcg ggagagaatttgtcgccttcctcatattgtgcaacttttctatgtgggccatgaatacgtttgaaacacagaaacctgaa cacaacccagtccaaatggacttctacggcccactaccttggtccatatttactcatattactgttccacttggaattta cttcaggtttcattctgccgtttgtttgaccaatatttggaaaaatgcatggaaaccgcatccaaattcaatagagagga gagaatccgaaaaggaagaagtttga |
|
Protein
| Protein ID | pfu_aug1.0_7438.1_02445.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7438.1_02445.t1 IYPRRNGYPWNGTMYIPEISCYWTELFGKVVDEAAPYLYPCKIEYSLICAGILIVMWRNVGFDKSSALNDTTSMSSAEPQ DKVHKRHKSVSCKSSSRGLFAGILVTVGAIITMIAFYVLRSKTKMDSTAIVLVHLSEAGMYILTTFAIVLAADRMKNLKF HVNIKGGIEEPLTLISFSGLFMFAVFSVVAATFEIHTPSGVLNILTNLFMIVQSTIQTLFIIAGSKVSAVTVEQERKKRG REFVAFLILCNFSMWAMNTFETQKPEHNPVQMDFYGPLPWSIFTHITVPLGIYFRFHSAVCLTNIWKNAWKPHPNSIERR ESEKEEV |
|