Gene
| Gene Model ID | pfu_aug1.0_7439.1_52954 |
|---|---|
| Locus | scaffold7439.1 : 13669 ... 19635 : - |
| To GenomeBrowser | scaffold7439.1:13669..19635 |
| Genes list of scaffold | scaffold7439.1 |
| Synonym | pfu_aug2.0_129.1_30251 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7439.1_52954.t1 | 1 | 1 | HECA | 49 | 150 | 5.10003e-41 | 138.7 | 8.40779e-45 | 1.3e-40 | 137.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7439.1_52954.t1 | gi|340726453|ref|XP_003401572.1| | PREDICTED: headcase protein [Bombus terrestris] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 2 |
| maleGonad | 2 |
| mantle | 4 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7439.1_52954.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7439.1_52954.t1 atgccgcaccataagcatcataagaatcaaaagttgaatcgagaagaagtggtgcaaaacctgcctcgtgatgcaaatgc aaacgtgcacggtgagggaaacgtcaacgagcaccgccaacggagaaatggccaggcgacttcgacagagtgctgtgttc cgtctgcatgtctttgccaaggtgagactataaatccctctgatccagatgatgctgtaagagtatattgtaataatgaa gcttgtacaatgggaaattggatgcataaggaatgctttatgcaatgggaggatacagtactggcttatttgaagtcctg cggtcgtgcaagaagctggagtgagaagcaacgtttgcaaaatctctggacgaaaaaaggatacgatcttgctttcaaag catgcgactgcaaatgcggaagggggcacctgcggaaagatcttaattacgttccgccgccgagaaacgacaatgccgca aaagcgaaaaagaagcacaaaaagaagaatgacaaacccgtggccgttgtctccaatgggaaaccagtacctgctacgaa cggaaacgctaatcaatcacaaaccaacaacaattcgaatgctgtaagccatgcgattacaaatcatctgaacaacgtca ataataacgcacagcgtgcgaccgagcgcgtggataacgccggtcgatgccagcttatacgtagcagtccgatagataca cccgtaacagaggaaggaggacgatctatacgaatgcgagcgaatagttgcgaaagtacaggtagctctccgcccaattc ctcggcgtcaactggctctgcatctccggctcccgtttctccgtcgccgtcgtctaatgataactttcctatcaaagcac cacgcccgaagttcgacttcccgccggagactaataactttggaatgtccattttccgacgccgccctgatctctcggct ttcaatgtgctacctaagcataaactgaatccgtatcatatcaagatggaggatgatataccacagggaaacgatgaaat acgcacgtttgtacatacgcaccttagtacgtacaaagtttcgtccatgaactgtgtgctatgtaagaacatgcttcctg tatttgaccgttatcccatgatagacggtactttcttcctgtcgcctcaagcttacgatgatagcgtcgtgcaggtgata tccgatgggcgcctacagttcatcaatgcggtatgcgttggctgtctggagggtggaagtgacgttcgatgcgctgcatg caagcggaagtgggatggaagcgccctgttactcgggaccatgtactcctatgatatctttgcggcgatgccatgttgcc agaagcggctgacttgcaagcagtgtcgacgtgcagtcgtagacgtcactactggtctgaacttttttagcgactatagt cgcatgatagcctgtccgtattgtaaggcgtacgactaccatttcatacgaccaatggcagacaccttcgccgtaaagca acctatatggaattaa |
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Protein
| Protein ID | pfu_aug1.0_7439.1_52954.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7439.1_52954.t1 MPHHKHHKNQKLNREEVVQNLPRDANANVHGEGNVNEHRQRRNGQATSTECCVPSACLCQGETINPSDPDDAVRVYCNNE ACTMGNWMHKECFMQWEDTVLAYLKSCGRARSWSEKQRLQNLWTKKGYDLAFKACDCKCGRGHLRKDLNYVPPPRNDNAA KAKKKHKKKNDKPVAVVSNGKPVPATNGNANQSQTNNNSNAVSHAITNHLNNVNNNAQRATERVDNAGRCQLIRSSPIDT PVTEEGGRSIRMRANSCESTGSSPPNSSASTGSASPAPVSPSPSSNDNFPIKAPRPKFDFPPETNNFGMSIFRRRPDLSA FNVLPKHKLNPYHIKMEDDIPQGNDEIRTFVHTHLSTYKVSSMNCVLCKNMLPVFDRYPMIDGTFFLSPQAYDDSVVQVI SDGRLQFINAVCVGCLEGGSDVRCAACKRKWDGSALLLGTMYSYDIFAAMPCCQKRLTCKQCRRAVVDVTTGLNFFSDYS RMIACPYCKAYDYHFIRPMADTFAVKQPIWN |
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