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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7466.1_60253
Locus scaffold7466.1 : 26736 ... 31075 : -
To GenomeBrowser scaffold7466.1:26736..31075
Genes list of scaffold scaffold7466.1
Synonym pfu_aug2.0_221.1_03823

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7466.1_60253.t1 gi|282165383|ref|YP_003357768.1| 6.0e-20

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
trochophore 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_7466.1_60253.t1
Definition-
>pfu_aug1.0_7466.1_60253.t1
atgtcactgaagagcattgctgtatttgcctttataacagtatgcaatttattactgttcacttacaacattccggatca
gaaagaaaagtacgcctttgcctgttccgtgtaccataatatagagtccttgtctcgctttgtatcatttaatggtgtca
aatcattgttgagtctgcttcctgaaatctgtaattctacgccaacatctgatcaaaatttagacgtgttcagacaggca
ttcaaagacgtaacgtacaaatgttcacaacagcggccaatgtcattagatatggaaataaggaaaccaatcttaacctt
gttcacatcgttcaacccatcgaaggaaaaaaagttagtgtatgatacgacaattcaaaattggagtacttttttaccta
agataaatttgatagtatatacgaacgatacaaatgtgaaggctttttgtgagtcacgtgggtggacagtgtttccggtt
acccatcatgcagcaggaggagtcccggtactgaagacaatgtttgaaacagcaatgaaaacttttgatacacaatttta
tggctttagtaatgctgacattctgtttactgataaacttttagaaaccctggtagtcactttaaaagattacggaaata
atgataaaatgttactaaccggaagaagatataacattccaatgcttacgccaaaagaggcagcttcttacgataacatt
cggactgcggtcagaactagaggtgaattatttatagaagcatccgaagatttctttattacatcaaaaacttttgattg
gagcaaagttccagatctcgtgattggtagacctgcctatgacaattggttagttgcgcatgctcgatgtacaggaaaca
cagttattgatgccacagacacaataatgtgtgcccatcagaccacgaattctgggaatatggaagggtggggaaacaaa
tttactgaatataatggtcaacttttacaaagactcaacatgaagagagattataataaaggatatattacatgtccaga
aataaaaagctttttcaacctctgtggaaatatacagacaacgaagagacatatacctgatttttgtaaatgctaa

Protein
Protein IDpfu_aug1.0_7466.1_60253.t1
Definition-
>pfu_aug1.0_7466.1_60253.t1
MSLKSIAVFAFITVCNLLLFTYNIPDQKEKYAFACSVYHNIESLSRFVSFNGVKSLLSLLPEICNSTPTSDQNLDVFRQA
FKDVTYKCSQQRPMSLDMEIRKPILTLFTSFNPSKEKKLVYDTTIQNWSTFLPKINLIVYTNDTNVKAFCESRGWTVFPV
THHAAGGVPVLKTMFETAMKTFDTQFYGFSNADILFTDKLLETLVVTLKDYGNNDKMLLTGRRYNIPMLTPKEAASYDNI
RTAVRTRGELFIEASEDFFITSKTFDWSKVPDLVIGRPAYDNWLVAHARCTGNTVIDATDTIMCAHQTTNSGNMEGWGNK
FTEYNGQLLQRLNMKRDYNKGYITCPEIKSFFNLCGNIQTTKRHIPDFCKC

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