Gene
| Gene Model ID | pfu_aug1.0_7466.1_60257 |
|---|---|
| Locus | scaffold7466.1 : 53986 ... 63123 : + |
| To GenomeBrowser | scaffold7466.1:53986..63123 |
| Genes list of scaffold | scaffold7466.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7466.1_60257.t1 | 1 | 1 | zf-UBP | 30 | 90 | 4.5e-16 | 58.7 | 8.5e-20 | 6.3e-16 | 58.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7466.1_60257.t1 | gi|260793200|ref|XP_002591600.1| | hypothetical protein BRAFLDRAFT_80696 [Branchiostoma floridae] | 8.0e-36 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7466.1_60257.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7466.1_60257.t1 atgtttgccgtctcacctctcagatggtgtccacatctggagacagttaaacccataccagacgatggtatagatacagg tctaccatgcgagacgtgtggtgacgcatcagaaaactggatatgtcttgtctgttacaaggtttattgcagtaggtttg ttcaggagcacatgttgatgcacggtttggaaacacagcatttgatgtgtcttagtttctcagatttgtctgtatggtgt tatggatgtgaccattatattgataatgaggtcttgtttccagctaaaaatagagcgcacgaacacaaatttggatcatc tctgccatcgccctttggttggatgagtatgacctga |
|
Protein
| Protein ID | pfu_aug1.0_7466.1_60257.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7466.1_60257.t1 MFAVSPLRWCPHLETVKPIPDDGIDTGLPCETCGDASENWICLVCYKVYCSRFVQEHMLMHGLETQHLMCLSFSDLSVWC YGCDHYIDNEVLFPAKNRAHEHKFGSSLPSPFGWMSMT |
|