Gene
| Gene Model ID | pfu_aug1.0_7475.1_38546 |
|---|---|
| Locus | scaffold7475.1 : 7406 ... 11506 : + |
| To GenomeBrowser | scaffold7475.1:7406..11506 |
| Genes list of scaffold | scaffold7475.1 |
| Synonym | pfu_aug2.0_229.1_30463 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7475.1_38546.t1 | 1 | 1 | Mab-21 | 62 | 206 | 1.2e-33 | 116.5 | 2.4e-37 | 1.8e-33 | 115.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7475.1_38546.t1 | gi|354481634|ref|XP_003503006.1| | PREDICTED: protein mab-21-like 1 [Cricetulus griseus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7475.1_38546.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7475.1_38546.t1 atgctggcagcccagtccaaaatactatttcaactgaataagtactataatgagagggttcaaaccagacaggcaagtac cgtgaagagtataagagaggtgtgcaaagtcgtgcaggatgtcctcaaagaagttgaggtgcaggaacctcgctttatta gctctctaaatgaggtaaacggacgctatgaaggactggacgtcatatcgcctacggagtttgaggttgtactttatttg aatcagatgggagttttcaattttgtggatgacggttctataccgggatgtgctgtgctcaaattaagtgacggtaggaa acgttctatgtcgctatgggtggaatttatcacggcatctggatacttgtctgctcggaagatcagatcaaggttccaaa ctctagtcgctcaggccgtggataaatgtagttttagggacacagtaaaaatggttgcggacactacagaagtcaaattg cgcatcaaagacaggtatgtggtgcaaattacgccgtcattccgttgcggcggcatttggtgccgaagtgccgctcactg gccgattccgcacattcagtggccgaatccgaatcttgtggccgaagtcaaaacgagggattcgatctcctttctagaga aagtatttatatga |
|
Protein
| Protein ID | pfu_aug1.0_7475.1_38546.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7475.1_38546.t1 MLAAQSKILFQLNKYYNERVQTRQASTVKSIREVCKVVQDVLKEVEVQEPRFISSLNEVNGRYEGLDVISPTEFEVVLYL NQMGVFNFVDDGSIPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKIRSRFQTLVAQAVDKCSFRDTVKMVADTTEVKL RIKDRYVVQITPSFRCGGIWCRSAAHWPIPHIQWPNPNLVAEVKTRDSISFLEKVFI |
|