Gene
| Gene Model ID | pfu_aug1.0_7478.1_31392 |
|---|---|
| Locus | scaffold7478.1 : 4376 ... 14664 : + |
| To GenomeBrowser | scaffold7478.1:4376..14664 |
| Genes list of scaffold | scaffold7478.1 |
| Synonym | NA |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | pitx-likeB |
| Description | NCBI BLASTP hit to gb|AAH73479.1| |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7478.1_31392.t1 | 1 | 1 | Homeobox | 140 | 174 | 1.4e-10 | 40.6 | 6.4e-14 | 2.4e-10 | 39.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7478.1_31392.t1 | gi|148234542|ref|NP_001081756.1| | paired-like homeodomain 2 [Xenopus laevis] | 2.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_7478.1_31392.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7478.1_31392.t1 atgacagcaaaggtcgttctgggttctggaaaatacatcgccatattttaccggaattcactacggggacattatgaaaa cgttatgcagtgcccggacgagtgtatctccgcccccggagagttccgaggacttgagtctatggactcactacaagatc atattacattagaccagtttgttgcaagtgttaattcttcagaagcgaatgtgactatgcatcacttagaaaatgcctcc aatgtcaatggggagtctggtataggactcaccagcccccagggtggggtccgtgtggacggtctgtcccccagctctac cgatacttctatagacaaacccacagattccaacgacgcatcgaagtctaagatggacgacagtgcgtcagatgacgaca aaaagaagaagcgtcaacgacgccaaaggacgcattttaccagccaacagttacaggaattagaagccacctttgcccgc aacagatatcccgatatggcgactagagaggaaatagcggncgtggttgcagcgattatgaagatattcatatga |
|
Protein
| Protein ID | pfu_aug1.0_7478.1_31392.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7478.1_31392.t1 MTAKVVLGSGKYIAIFYRNSLRGHYENVMQCPDECISAPGEFRGLESMDSLQDHITLDQFVASVNSSEANVTMHHLENAS NVNGESGIGLTSPQGGVRVDGLSPSSTDTSIDKPTDSNDASKSKMDDSASDDDKKKKRQRRQRTHFTSQQLQELEATFAR NRYPDMATREEIAXVVAAIMKIFI |
|