Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7486.1_38548
Locus scaffold7486.1 : 1 ... 3705 : -
To GenomeBrowser scaffold7486.1:1..3705
Genes list of scaffold scaffold7486.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7486.1_38548.t1 1 1 VWA 41 210 1.2e-40 139.1 7.14662e-44 1.50001e-40 138.7
pfu_aug1.0_7486.1_38548.t1 1 1 VWA_2 41 184 8.2e-14 52.0 4.5e-17 9.5e-14 51.8

Transcript
Transcript IDpfu_aug1.0_7486.1_38548.t1
Definition-
>pfu_aug1.0_7486.1_38548.t1
atgcaaaaacacaaaagacgagtacagcacgagacggaaaagagacacacgacatgtaaacatcaaacacaaaagactac
acataaaccgacgagaccaatggattgcaaagaaaagagtgacattgtgtttgtgatagacgactcgatcagtgttgctg
tggccagtttcgagaaagccaaaagtttcataaagagggttctactaccagcaaacatcgattcaggagacgtaagagta
gggttacttaaattcagtactaatgcaagtgttgaatttgatctcaatacatatacatcgaaacagcaattgtttagaca
tgtggattcgatgcaacaaacgtttggtgcaacatacacagcagaggcgcttagggttatgaatgaagaaatgttcagtg
aatcaaagggtgctcgcgataatgttcagaatgttgcaatagtggttacagacggacgttcaagggatgccacgaagacc
cttgaaagagcaaaacagtcccatcaaaatggcgttcatattatcgccattggtgttggtgatgtaatagaggatgagat
aagtggaatagcatcactgccgtccattgaaaatgcttttattcttgaaggattcgcacagcttcgtcgcttcaaagaag
atttcttcaaattctgcaaag

Protein
Protein IDpfu_aug1.0_7486.1_38548.t1
Definition-
>pfu_aug1.0_7486.1_38548.t1
MQKHKRRVQHETEKRHTTCKHQTQKTTHKPTRPMDCKEKSDIVFVIDDSISVAVASFEKAKSFIKRVLLPANIDSGDVRV
GLLKFSTNASVEFDLNTYTSKQQLFRHVDSMQQTFGATYTAEALRVMNEEMFSESKGARDNVQNVAIVVTDGRSRDATKT
LERAKQSHQNGVHIIAIGVGDVIEDEISGIASLPSIENAFILEGFAQLRRFKEDFFKFCK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495