Gene
| Gene Model ID | pfu_aug1.0_7489.1_17123 |
|---|---|
| Locus | scaffold7489.1 : 26587 ... 45085 : - |
| To GenomeBrowser | scaffold7489.1:26587..45085 |
| Genes list of scaffold | scaffold7489.1 |
| Synonym | pfu_aug2.0_972.1_08058 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7489.1_17123.t1 | 1 | 1 | DUF303 | 105 | 377 | 0.0 | 225.7 | 0.0 | 0.0 | 225.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7489.1_17123.t1 | gi|260805680|ref|XP_002597714.1| | hypothetical protein BRAFLDRAFT_217332 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7489.1_17123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7489.1_17123.t1 atgcattcctacctttgtataggtcctggtacattttcattcgcctcatactatggcgataatatggtgttggaacaggc accacagaaagcagttatatggggatatacagaaaaggtcggagaaaacatcacaggcacaatgcatactacccctatca taataacaactgtcgtctctgcatacaaaccaaacgtgaagggcgctatttggcgcatagatttttccgcacaacaacat agctccacggggataaagatcgaggtatccaggacaaatggccagaaaatctccatttctaatgttctgtttggagatgt ctgggtatgctctggacaaagtaatatgcagtttacacttgatatggctttcaatgctactcaagaaatcgaggatgcca aaaattatccaaatataagggttttcactgcttctgaagaaacatcatctgtaccagagttggaccttagaggtgtggaa gagatatggtcaataccaagcaaagacacattgggacacaagccttggacgtatttttctgccgtgtgttggttgtacgg gaaatacttataccagaatctcaaagttcctgtaggacttgtgtgttcaacatgggcaggaactgcaatagaactgtggt cctcagctgatgccctgaagaagtgtaatattccacaatacgtacagacaaaggaatatgtgaccgaacatggctgggtt ggaataggccattcccagctatggaatgccatgatgcatccgtttataaacatgacgatcaagggtgttatttggtatca aggtgaggcaaatgcaggatcaccagcaagttatctctgtacatttcctacaatgataagtgattggagggacaaattca accaagggaattctgaaaatgatcctatgtttccctttggctttgtacagttggcaggctacagaaataagaccataaag acaggcttccctgacatacgctggcatcagaccgcagacatgggctatgtaccaaatccagctctacaaaatgtatttat ggcggttgctatggatttacccgacttcacttctccagagggaagtattcatccaagagacaagcaggacgtagctgcta ggctggctttgtctggcctaacagtggcttatggtaaggacctggggaattttcagggaccaaagatcagtgcattttat attgatatcggcttcttcactctttgtctggagtttgatagcagcaaaacaacactggatgtacgatcaaacaacggatt tgaagtttgctgttcacgtaacaaccaatcgaaatgcaatgactccgattcaacctggatggacacgcctataatcaaac atgacgctcacagtgttaccttatcatacaacggcacatgcgcaaacaaatacgtcatgggattgcgatacgcatggcag gaatcaccgtgtgactttaagaagtgtgcagtctatattacggagaacaatatgcccttggcaccctttgttacacttgg actgattgtatggagattattttacactacaattgtgcgttatacgagacctcttggtaaccggaaaagtgggaatgatg tgggcacgtaa |
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Protein
| Protein ID | pfu_aug1.0_7489.1_17123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7489.1_17123.t1 MHSYLCIGPGTFSFASYYGDNMVLEQAPQKAVIWGYTEKVGENITGTMHTTPIIITTVVSAYKPNVKGAIWRIDFSAQQH SSTGIKIEVSRTNGQKISISNVLFGDVWVCSGQSNMQFTLDMAFNATQEIEDAKNYPNIRVFTASEETSSVPELDLRGVE EIWSIPSKDTLGHKPWTYFSAVCWLYGKYLYQNLKVPVGLVCSTWAGTAIELWSSADALKKCNIPQYVQTKEYVTEHGWV GIGHSQLWNAMMHPFINMTIKGVIWYQGEANAGSPASYLCTFPTMISDWRDKFNQGNSENDPMFPFGFVQLAGYRNKTIK TGFPDIRWHQTADMGYVPNPALQNVFMAVAMDLPDFTSPEGSIHPRDKQDVAARLALSGLTVAYGKDLGNFQGPKISAFY IDIGFFTLCLEFDSSKTTLDVRSNNGFEVCCSRNNQSKCNDSDSTWMDTPIIKHDAHSVTLSYNGTCANKYVMGLRYAWQ ESPCDFKKCAVYITENNMPLAPFVTLGLIVWRLFYTTIVRYTRPLGNRKSGNDVGT |
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