Gene
| Gene Model ID | pfu_aug1.0_7496.1_31398 |
|---|---|
| Locus | scaffold7496.1 : 36334 ... 46885 : - |
| To GenomeBrowser | scaffold7496.1:36334..46885 |
| Genes list of scaffold | scaffold7496.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7496.1_31398.t1 | 1 | 1 | Ank_2 | 222 | 281 | 3.0e-08 | 33.8 | 3.7e-11 | 6.8e-08 | 32.7 |
| pfu_aug1.0_7496.1_31398.t1 | 1 | 1 | Ank_4 | 223 | 276 | 7.9e-08 | 32.6 | 8.4e-11 | 1.6e-07 | 31.6 |
| pfu_aug1.0_7496.1_31398.t1 | 2 | 1 | Ank | 225 | 253 | 5.4e-06 | 25.9 | 0.047 | 88.0 | 3.1 |
| pfu_aug1.0_7496.1_31398.t1 | 2 | 1 | Ank_5 | 229 | 263 | 2.9e-06 | 27.3 | 1.0e-05 | 0.019 | 15.1 |
| pfu_aug1.0_7496.1_31398.t1 | 2 | 2 | Ank_5 | 247 | 276 | 2.9e-06 | 27.3 | 7.2e-07 | 0.0013 | 18.8 |
| pfu_aug1.0_7496.1_31398.t1 | 2 | 2 | Ank | 256 | 280 | 5.4e-06 | 25.9 | 2.2e-07 | 0.00041 | 20.0 |
| pfu_aug1.0_7496.1_31398.t1 | 1 | 1 | RA | 538 | 638 | 3.5e-09 | 37.0 | 1.1e-11 | 2.0e-08 | 34.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7496.1_31398.t1 | gi|118099710|ref|XP_425378.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7496.1_31398.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7496.1_31398.t1 atggaattacaaaagattgccaaaagtgttttgtacaagaaaacaaagactcaagatttacgacgaaacgggtcattaaa accaaagaaagatcatatattgtctaaatgcggtagtgaagaaaaagtggtatcagagaacgcgccgagcagtgacttgt cgtctgctccgcacgcgcacactcccccgccgcctcgaccccgcagcgcgtggagcggggaagataatacggagggaccg gttgctcccgccacgcccgaccttctcaggaatacgtcctcccccagtgtagacaaagggatgtattacactacccctcc caatgcgaatattatcagacatacggaggagaagaagcacggagtgacaaaatgtaccagccagtatttctcagatcgca aggaggagggaccgggagagaagcagagatccttcagcgaggattggagtgcagtccgactatttcagggaaatggacag atgaaaaatggcacggattcaccacttttgcggaggatcgcgaacactcacaattcttcatatcgtctgtcgaagattct ctcagcctcgcaatcaaaacgaggctccacagcgtccattgctggagggtaccacgactcagctttcccgcggagaaaat cagaggacaagaaattacctagcaacgtgaaggctttattcgaggcagtcgaacaacaagacatcgatctagtcaaaaat ttactggaaatagaatcaacagacataaactgctacaacaacgagggactgaccccgcttgatgtggcggtgcttaccaa taacattccaatggcaaagatcctactttatcatggagcaaaagaaagtccactgtttcagaaggaagaaattcggtcta tgcgtcttgatgacttagtttcagatgcagaaaaacgagtagtagagctatcggcaatgatgcttaatgttccatcggga agtagtactgtatcgtcatcacaacaaaaagaaaacgagaaacaattaagtcactgggacgcacgacataaactcttgaa aagaatgaaggcaggatatgatcatgcccgaataccagacccgcccagttatgttagtttgtccgttgcaagcgctacat ctcttctcgtcaagtttgacgaacctctaaatcacaatggtgccgttgtgacacgttacaaagtgcagtggagctgcttc gaagactttgtaccgaacctccggaaagcgttctcgtccagcgaattacaagcttctcgcaatcagctttccaagctgtc tgaaatacaattgacgttggacaatgcttggaatacgacgagatgggtacgtagtattatcacgtatgcaagagacaaat caaaaccaggaggtgtacgtattggcaccgtgaccgcgccatgttcggatcaggatctcccggatcagtgtctgcaagaa gtcggtgacgtcatgggctctacagacgatttgactaattcttgttttgatggaaacgaaataagtgtcggtaaagatca gagaaaaatcgcaaaattttacgatccaacggatgaaatgtcggaaaatagatcgtcacctctgaacgtggactctcctt ccggtacggagtcgggagtgttgcaagtatacgcagcgtacgattcgggtctgttaatgggaacgcgcgtacgattacat gttacttctaagacaactgctcgagacatcattaatttggtggtcaaacagttgaatagggctttgactctcaagggtaa aggagggcctatctactccgaagacaaactctgtgatttctgtttggtggctgtgatatctggatcaagggaaagaatcc tgagggacgatttcaaacccctaaaattacaaaatccatggaaagatggaaagttgtacgtgagactgaaaaacaaccta ctagcggctattcaacatggcagggcaacggaggtttag |
|
Protein
| Protein ID | pfu_aug1.0_7496.1_31398.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7496.1_31398.t1 MELQKIAKSVLYKKTKTQDLRRNGSLKPKKDHILSKCGSEEKVVSENAPSSDLSSAPHAHTPPPPRPRSAWSGEDNTEGP VAPATPDLLRNTSSPSVDKGMYYTTPPNANIIRHTEEKKHGVTKCTSQYFSDRKEEGPGEKQRSFSEDWSAVRLFQGNGQ MKNGTDSPLLRRIANTHNSSYRLSKILSASQSKRGSTASIAGGYHDSAFPRRKSEDKKLPSNVKALFEAVEQQDIDLVKN LLEIESTDINCYNNEGLTPLDVAVLTNNIPMAKILLYHGAKESPLFQKEEIRSMRLDDLVSDAEKRVVELSAMMLNVPSG SSTVSSSQQKENEKQLSHWDARHKLLKRMKAGYDHARIPDPPSYVSLSVASATSLLVKFDEPLNHNGAVVTRYKVQWSCF EDFVPNLRKAFSSSELQASRNQLSKLSEIQLTLDNAWNTTRWVRSIITYARDKSKPGGVRIGTVTAPCSDQDLPDQCLQE VGDVMGSTDDLTNSCFDGNEISVGKDQRKIAKFYDPTDEMSENRSSPLNVDSPSGTESGVLQVYAAYDSGLLMGTRVRLH VTSKTTARDIINLVVKQLNRALTLKGKGGPIYSEDKLCDFCLVAVISGSRERILRDDFKPLKLQNPWKDGKLYVRLKNNL LAAIQHGRATEV |
|